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CVS Commit History:
2015-01-28 17:36:28 by Jason Bacon | Files touched by this commit (5) |
Log message:
Import jellyfish-1.1.11 as wip/jellyfish.
Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.
A k-mer is a substring of length k, and counting the occurrences of all such
substrings is a central step in many analyses of DNA sequence. JELLYFISH can
count k-mers quickly by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase parallelism.
WWW: http://www.genome.umd.edu/jellyfish.html
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