./graphics/circos, Concise, explanatory, unique and print-ready data visualization

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Branch: CURRENT, Version: 0.49nb6, Package name: circos-0.49nb6, Maintainer: schmonz

Circos is a Perl application for the generation of publication-quality,
circularly composited renditions of genomic data and related annotations.

Circos is particularly suited for visualizing alignments, conservation and
intra and inter-chromosomal relationships.


Required to run:
[graphics/p5-GD] [shells/bash] [math/p5-Math-Bezier] [devel/p5-Set-IntSpan] [devel/p5-Config-General] [devel/p5-Params-Validate] [devel/p5-Clone] [math/p5-Math-VecStat] [math/p5-Math-Round]

Master sites:

SHA1: 04cbdd25ba86104d2f68d5feb611f37ddc409bca
RMD160: 00f2d9913530781849a2ea48097eb05a5824f0c4
Filesize: 71746.159 KB

Version history: (Expand)


CVS history: (Expand)


   2016-07-09 08:39:18 by Thomas Klausner | Files touched by this commit (1068) | Package updated
Log message:
Bump PKGREVISION for perl-5.24.0 for everything mentioning perl.
   2015-11-03 22:34:36 by Alistair G. Crooks | Files touched by this commit (610)
Log message:
Add SHA512 digests for distfiles for graphics category

Problems found with existing digests:
	Package fotoxx distfile fotoxx-14.03.1.tar.gz
	ac2033f87de2c23941261f7c50160cddf872c110 [recorded]
	118e98a8cc0414676b3c4d37b8df407c28a1407c [calculated]
	Package ploticus-examples distfile ploticus-2.00/plnode200.tar.gz
	34274a03d0c41fae5690633663e3d4114b9d7a6d [recorded]
	da39a3ee5e6b4b0d3255bfef95601890afd80709 [calculated]

Problems found locating distfiles:
	Package AfterShotPro: missing distfile AfterShotPro-1.1.0.30/AfterShotPro_i386.deb
	Package pgraf: missing distfile pgraf-20010131.tar.gz
	Package qvplay: missing distfile qvplay-0.95.tar.gz

Otherwise, existing SHA1 digests verified and found to be the same on
the machine holding the existing distfiles (morden).  All existing
SHA1 digests retained for now as an audit trail.
   2015-06-12 12:52:19 by Thomas Klausner | Files touched by this commit (3152)
Log message:
Recursive PKGREVISION bump for all packages mentioning 'perl',
having a PKGNAME of p5-*, or depending such a package,
for perl-5.22.0.
   2014-05-30 01:38:20 by Thomas Klausner | Files touched by this commit (3049)
Log message:
Bump for perl-5.20.0.
Do it for all packages that
* mention perl, or
* have a directory name starting with p5-*, or
* depend on a package starting with p5-
like last time, for 5.18, where this didn't lead to complaints.
Let me know if you have any this time.
   2013-05-31 14:42:58 by Thomas Klausner | Files touched by this commit (2880)
Log message:
Bump all packages for perl-5.18, that
a) refer 'perl' in their Makefile, or
b) have a directory name of p5-*, or
c) have any dependency on any p5-* package

Like last time, where this caused no complaints.
   2012-10-06 16:11:27 by Aleksej Saushev | Files touched by this commit (427)
Log message:
Drop superfluous PKG_DESTDIR_SUPPORT, "user-destdir" is default these days.
   2012-10-03 23:59:10 by Thomas Klausner | Files touched by this commit (2798)
Log message:
Bump all packages that use perl, or depend on a p5-* package, or
are called p5-*.

I hope that's all of them.
   2010-06-08 15:52:57 by Thomas Klausner | Files touched by this commit (1)
Log message:
Fix dependency pattern.