./graphics/py-tifffile, Read and write TIFF(r) files

[ CVSweb ] [ Homepage ] [ RSS ] [ Required by ] [ Add to tracker ]

Branch: CURRENT, Version: 2024.4.18, Package name: py311-tifffile-2024.4.18, Maintainer: pkgsrc-users

Tifffile is a Python library to
* store numpy arrays in TIFF (Tagged Image File Format) files, and
* read image and metadata from TIFF-like files used in bioimaging.
Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK,
LSM, SGI, NIHImage, ImageJ, MicroManager, FluoView, ScanImage, SEQ,
GEL, SVS, SCN, SIS, ZIF (Zoomable Image File Format), QPTIFF (QPI),
NDPI, and GeoTIFF files.

Master sites:

Filesize: 355.313 KB

Version history: (Expand)

CVS history: (Expand)


   2024-04-21 20:14:20 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-tifffile: updated to 2024.4.18

2024.4.18

- Pass 5077 tests.
- Fix write_fsspec when last row of tiles is missing in Philips slide.
- Add option not to quote file names in write_fsspec.
- Allow compress bilevel images with deflate, LZMA, and Zstd.
   2024-02-13 06:09:35 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-tifffile: updated to 2024.2.12

2024.2.12

- Pass 5074 tests.
- Deprecate dtype, add chunkdtype parameter in FileSequence.asarray.
- Add imreadargs parameters passed to FileSequence.imread.
   2024-01-31 00:52:24 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-tifffile: updated to 2024.1.30

2024.1.30

- Pass 5071 tests.
- Fix compatibility issue with numpy 2.
- Enable DeprecationWarning for tuple compression argument.
- Parse sequence of numbers in xml2dict.
   2023-12-17 17:00:08 by Adam Ciarcinski | Files touched by this commit (3) | Package updated
Log message:
py-tifffile: updated to 2023.12.9

2023.12.9

- Pass 5071 tests.
- Read 32-bit Indica Labs TIFF as float32.
- Fix UnboundLocalError reading big LSM files without time axis.
- Use os.sched_getaffinity, if available, to get the number of CPUs.
- Limit the number of default worker threads to 32.
   2023-09-27 14:13:13 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-tifffile: updated to 2023.9.26

2023.9.26

- Pass 5069 tests.
- Lazily convert dask array to ndarray when writing.
- Allow to specify buffersize for reading and writing.
- Fix IndexError reading some corrupted files with ZarrTiffStore

2023.9.18

- Raise exception when writing non-volume data with volumetric tiles
- Improve multi-threaded writing of compressed multi-page files.
- Fix fsspec reference for big-endian files with predictors.
   2023-08-31 16:07:36 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-tifffile: updated to 2023.8.30

2023.8.30

- Pass 5007 tests.
- Support exclusive file creation mode
   2023-08-26 10:33:23 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-tifffile: updated to 2023.8.25

2023.8.25

- Pass 5003 tests.
- Verify shaped metadata is compatible with page shape.
- Support out parameter when returning selection from imread.
- Support exclusive file creation mode.
   2023-08-25 15:49:29 by Adam Ciarcinski | Files touched by this commit (3) | Package updated
Log message:
py-tifffile: updated to 2023.8.12

2023.8.12

- Pass 4996 tests.
- Support decompressing EER frames.
- Facilitate filtering logged warnings
- Read more tags from UIC1Tag
- Fix premature closing of files in main
- Don't force matplotlib backend to tkagg in main
- Add py.typed marker.
- Drop support for imagecodecs < 2023.3.16.