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((V)irtual = Package is only listed here)

R | Statistical language for data analysis and graphics | |

R-BiocGenerics (V) | Generic functions for Bioconductor | |

R-C50 (V) | C5.0 decision trees and rule-based models | |

R-CGIwithR | Facilities for the use of R to write CGI scripts | |

R-DAAG | Data Analysis And Graphics data and functions | |

R-DBI | R Database Interface | |

R-FNN | Fast Nearest Neighbor Search Algorithms and Applications | |

R-GRASS | Interface between GRASS 5.0 geographical information system and R | |

R-ISLR | Data for the ISLR book | |

R-ISwR | Data sets and scripts for 'Introductory Statistics with R' | |

R-MatrixModels | Modelling with Sparse And Dense Matrices | |

R-MySQL (V) | R interface for MySQL | |

R-PHYLOGR | Manipulation of phylogenetically simulated data sets using GLS | |

R-R2HTML | R functions to write an HTML file | |

R-RArcInfo | Read geographical information from Arc/Info | |

R-RColorBrewer | ColorBrewer palettes | |

R-RNetCDF | High-level R interface to Unidata's netCDF data files | |

R-RPostgreSQL | R interface to the PostgreSQL database system | |

R-RandomFields | Simulation and analysis of random fields | |

R-Rcmdr | Platform-independent basic-statistics GUI for R | |

R-RcppArmadillo | Testing linear regression models | |

R-RcppEigen | Rcpp integration for the Eigen templated linear algebra library | |

R-Rgraphviz (V) | Plotting capabilities for R graph objects | |

R-Rserve (V) | TCP/IP server which allows other programs to use facilities of R | |

R-SparseM | Sparse Linear Algebra | |

R-VGAM | Vector Generalized Linear and Additive Models | |

R-XML | Tools for parsing and generating XML within R | |

R-abind | Combine multi-dimensional arrays | |

R-akima | Linear or cubic spline interpolation for irregular gridded data | |

R-aplpack | Functions for drawing special plots | |

R-bbmle | Tools for general maximum likelihood estimation | |

R-biganalytics (V) | Library of utilities for big.matrix objects of package bigmemory | |

R-bigmemory (V) | Manage massive matrices with shared memory and memory-mapped files | |

R-bigmemory.sri (V) | Shared resource interface for Bigmemory Project packages | |

R-bigtabulate (V) | R table, tapply, and split-like functionality for (big.)matrix objects | |

R-bitops | Functions for Bitwise operations on integer vectors | |

R-bnlearn (V) | Bayesian network structure learning, parameter learning and inference | |

R-car | Accompanies An R Companion to Applied Regression, 2nd Edition | |

R-carData | Companion to Applied Regression Data Sets | |

R-chron | Chronological objects which can handle dates and times | |

R-circular | Circular Statistics, from Topics in circular Statistics | |

R-classInt | Package for choosing univariate class intervals for graphics | |

R-clim.pact | Climate analysis and downscaling for monthly and daily data | |

R-coda | Output analysis and diagnostics for MCMC | |

R-combinat | Routines for combinatorics | |

R-cubature (V) | Adaptive Multivariate Integration over Hypercubes | |

R-date | Functions for Handling Dates | |

R-doParallel (V) | Foreach parallel adaptor for the parallel package | |

R-e1071 | Misc Functions of the Department of Statistics (e1071), TU Wien | |

R-emdbook | Support functions and data for Ecological Models and Data | |

R-entropy (V) | Estimation of Entropy, Mutual Information and Related Quantities | |

R-fitdistrplus (V) | Fit a Parametric Distribution to Non-Censored or Censored Data | |

R-foreach (V) | Foreach looping construct for R | |

R-forecast | Forecasting functions for time series and linear models | |

R-fracdiff | Fractionally differenced ARIMA aka ARFIMA(p,d,q) models | |

R-gdata | Various R programming tools for data manipulation | |

R-genetics | Classes and methods for handling genetic data | |

R-geoR | Geostatistical analysis including likelihood-based &amp; Bayesian methods | |

R-geoRglm | Generalised linear spatial models in R | |

R-gmp (V) | Multiple Precision Arithmetic for R | |

R-graph (V) | R package to handle graph data structures | |

R-gsl (V) | R wrapper for the Gnu Scientific Library | |

R-gss | General smoothing splines | |

R-gstat | Uni/multivariable geostatistical modelling, prediction and simulation | |

R-gtable | Arrage 'grobs' in tables | |

R-gtools | Various R programming tools | |

R-httpRequest | Implements the GET, POST and multipart POST request | |

R-hwde | Models and tests for departure from Hardy-Weinberg equilibrium | |

R-igraph | Network Analysis and Visualization | |

R-intervals | Tools for working with points and intervals | |

R-lme4 | Linear mixed-effects models using Eigen and S4 | |

R-lmm | Improved procedures for linear mixed models with R | |

R-lmtest | Testing linear regression models | |

R-lsei (V) | Solving Least Squares under Equality/Inequality Constraints | |

R-mapproj | Converts latitude/longitude into projected coordinates | |

R-maps | Display maps in R | |

R-mclust (V) | Model-based clustering and normal mixture modeling | |

R-minqa | Derivative-free optimization algorithms by quadratic approximation | |

R-moonsun | Basic astronomical calculations with R | |

R-mpfr (V) | Multiple Precision Floating Point Arithmetic for R | |

R-mvtnorm | Computes the multivariate normal and t distribution | |

R-ncdf | High-level R interface to Unidata's netCDF data files | |

R-nloptr | R interface to NLopt | |

R-np (V) | Nonparametric Kernel Smoothing Methods for Mixed Data Types | |

R-npsurv (V) | Nonparametric Survival Analysis | |

R-numDeriv | Accurate numerical derivatives | |

R-pbkrtest | Parametric bootstrap and Kenward-Roger-based methods | |

R-pixmap | Functions for manipulations of bitmaps with R | |

R-plyr | Tools for splitting, applying and combining data | |

R-png (V) | Read and write PNG images | |

R-poweRlaw | Analysis of heavy tailed distributions | |

R-prettyunits | Pretty, Human Readable Formatting of Quantities | |

R-prob | Elementary probability on finite sample spaces | |

R-quadprog | Functions to solve quadratic programming problems | |

R-quantreg | Quantile Regression | |

R-randomForest | Classification and regression based on a forest of trees | |

R-readxl (V) | Read excel files into R tables | |

R-reshape2 | Flexibly reshape data | |

R-rgdal (V) | Provides bindings to GDAL and R | |

R-sgeostat | Object-oriented framework for geostatistical modeling in S+ | |

R-shapefiles | Functions to read and write ESRI shapefiles | |

R-signal (V) | Signal Processing | |

R-sp | Classes and methods for spatial data | |

R-spacetime | Classes and methods for spatio-temporal data | |

R-splancs | Spatial and space-time point pattern analysis | |

R-stabledist | Stable distribution functions | |

R-statmod | Miscellaneous biostatistical modeling functions | |

R-tibble | Simple data frames | |

R-tuneR (V) | Analysis of Music and Speech | |

R-wle | Weighted Likelihood Estimation | |

R-xtable | Export Tables to LaTeX or HTML | |

R-xts | R's eXtensible Time Series | |

R-zoo | S3 Infrastructure for Regular and Irregular Time Series | |

TinySVM | Tiny Support Vector Machines | |

aamath | ASCII art mathematics | |

abs | Free spreadsheet with graphical user interface | |

admesh | Program for processing triangulated solid meshes | |

algae | Interpreted language for numerical analysis | |

amath | Simple command line calculator | |

analitza | KDE library for mathematical features | |

antixls | Print XLS file with minimal formatting, or as CSV | |

aribas | Multi-precision floating point and big integer arithmetic calculator | |

arpack | Library of subroutines to solve eigenvalue problems | |

bc | Arbitrary precision calculator language | |

bcal | Storage and general-purpose calculator | |

blas | Basic Linear Algebra Subprograms (Fortran) | |

blitz++ | C++ template class library providing array objects | |

boolstuff | Disjunctive Normal Form boolean expression C++ library | |

calc | Advanced Calculator for GNU Emacs | |

calcoo | Scientific calculator | |

cantor | KDE frontend to mathematical software | |

capc-calc | C arbitrary precision calculator | |

cgal | Computational Geometry Algorithms Library | |

clasp (V) | Answer set solver for (extended) normal logic programs | |

classias | Collection of machine-learning algorithms for classification | |

clisp-pari | CLISP pari module | |

cln | CLN Class Library for Numbers | |

cloog | Code generator for loop optimization (used by gcc) | |

coinmp | Linear Programming solver library | |

crfsuite | Fast implementation of Conditional Random Fields (CRFs) | |

dcdflib.c | Library of C Routines for Cumulative Distribution Functions | |

dcdflib.f | Library of Fortran Routines for Cumulative Distribution Functions | |

dfftpack | Double precision version of FFTPACK | |

dieharder | Random number generator test suite | |

djbfft | Extremely fast library for floating-point convolution | |

djbsort | Library for sorting arrays of integers | |

dlpoly-classic (V) | General purpose classical molecular dynamics | |

dolfin (V) | C++/Python interface of FEniCS | |

double-conversion (V) | Conversion routines for IEEE doubles | |

eigen2 | C++ template library for linear algebra | |

eigen3 | C++ template library for linear algebra | |

eispack | Fortran routines for the solution of eigenvalue problems | |

ess | Emacs Speaks Statistics | |

eukleides | Euclidean geometry drawing language | |

eukleides10 | Euclidean geometry drawing language | |

euler | Interactive numerical analysis and graphics program | |

extcalc | Scientific graphic calculator | |

fftpack | Single precision Fortran FFT subroutines | |

ffts | The Fastest Fourier Transform in the South | |

fftw | Collection of fast C routines to compute DFTs | |

fftw2 | Collection of fast C routines to compute DFTs | |

fftwf | Collection of fast C routines to compute DFTs | |

fgmp | Minimalist free re-implementation of GNU multi-precision routines | |

fityk | Peak fitting software | |

fricas | FriCAS is a fork of the Axiom computer algebra system | |

fxrays (V) | Computes extremal rays with filtering | |

galculator | Desktop calculator with scientific / RPN modes | |

gap | Computational group theory and discrete algebra language | |

gcalctool | Desktop calculator for GNOME | |

geg | Program for drawing 2D math functions within a nice GUI | |

genius | Calculator and math tool | |

glpk | Library for solving linear programming problems | |

gnome-calculator | Desktop calculator for GNOME | |

gnumeric112 | Spreadsheet program from the GNOME project | |

go-stats | Statistics package to supplement the Golang standard library | |

go-units | Helpful unit multipliers and functions for Go | |

gp-autpgrp | GAP package for finding automorphism groups of finite p-groups | |

gp-factint | Integer factorization routines for GAP | |

gp-fplsa | GAP interface to FPLSA | |

gp-grape | GRAPE (GRape Algorithms using PErmutation groups) | |

gp-grpconst | GAP package for finding isomorphism classes of finite groups | |

gp-lag | GAP Bracket Lie Algebra functions | |

grace | GRaphing, Advanced Computation and Exploration of data | |

graphopt | Optimize graph layouts | |

grpn | Graphical reverse polish notation (RPN) calculator | |

gsl | The GNU Scientific Library | |

gtklife | The game of life | |

harminv | Solver of harmonic inversion | |

heirloom-factor | Collection of standard Unix utilities (factor) | |

heirloom-units | Collection of standard Unix utilities (units) | |

herisvm | svm-train wrapper running cross-validation in parallel | |

hs-distributive | Haskell 98 Distributive functors -- Dual to Traversable | |

hs-mwc-random | Fast, high quality pseudo random number generation | |

hs-nats | Haskell 98 natural numbers | |

hs-scientific | Numbers represented using scientific notation | |

hs-semigroups | Anything that associates | |

ipopt | Interior Point OPTimizer | |

isl | Integer set library required by gcc graphite | |

itpp | Library of mathematical, signal processing and communication routines | |

kalgebra | KDE graph calculator | |

kcalc | KDE scientific calculator | |

lapack | Linear Algebra PACKage | |

libffm | Fast alpha-optimized replacement for some libm routines | |

libint | Efficient computation of quantum mechanical matrix elements over Gaussian basis sets | |

libixion | General purpose formula parser &amp; interpreter | |

liblbfgs | Library of Limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS) | |

liblinear | Library for large linear classification | |

libmatheval | Library for evaluating mathematical expressions | |

libnumbertext | Convert to number names from numbers | |

libshorttext | Library for short-text classification and analysis | |

libsvm | Library for Support Vector Machines | |

linpack | Library of linear algebra Fortran routines | |

lp_solve | Mixed Integer Linear Programming (MILP) solver | |

ltm | Number theoretic multiple-precision integer library | |

mapm | Arbitrary Precision Math library | |

mathomatic | Small portable symbolic math program | |

maxima | Computer algebra system | |

mcsim | Monte Carlo Simulation software | |

meschach | Library of C Routines for Matrix Computations | |

metis | Unstructured graph partitioning and sparse matrix ordering system | |

mimetex (V) | CGI to convert LaTeX math expression to GIF image | |

minisat | Minimalistic yet highly efficient SAT solver | |

minpack | FORTRAN 77 library for the solution of nonlinear equations | |

mpcomplex | Multiprecision complex arithmetic library | |

mpfr | GMP-based library for multiple-precision floating-point computations | |

mprime-bin | Mersenne prime tester (binary) | |

mtl | Matrix Template Library | |

muparser | Parser for mathematical expressions | |

newmat | Newmat C++ Matrix Library | |

nickle | Desk calculator language | |

nlopt | Nonlinear optimization library | |

ntl | C++ library for doing number theory | |

ocaml-num | Library for arbitrary-precision arithmetic | |

ocaml-zarith | OCaml arithmetic library for arbitrary precision integers | |

octave | High-level language, intended for numerical computations | |

odepack | Systematized Collection of ODE Solvers | |

openaxiom | Platform for symbolic, algebraic, and numerical computations | |

openfst | OpenFst is a library for manipulating transducers | |

ordCalc | Ordinal arithmetic calculator and research tool | |

otter | Automated Deduction System | |

p5-Algorithm-BloomFilter | Simple bloom filter data structure | |

p5-Algorithm-Cluster | Perl interface to the C Clustering Library | |

p5-Algorithm-Munkres | Munkres Assignment for square and rectangular matrices | |

p5-Alien-GMP | Alien package for the GNU Multiple Precision library | |

p5-Bit-Vector-Minimal (V) | Object-oriented wrapper around Perl's vec() | |

p5-Excel-Template | Perl module for templating Excel files | |

p5-Excel-Template-Plus | Extension to the Excel::Template module | |

p5-Math-Base-Convert | Very fast base to base conversion | |

p5-Math-Base36 | Perl 5 module to encode and decode base36 strings | |

p5-Math-Base85 | Perl extension for base 85 numbers, as referenced by RFC 1924 | |

p5-Math-BaseCnv | Fast functions to CoNVert between number Bases | |

p5-Math-Bezier | Perl module for the solution of Bezier curves | |

p5-Math-BigInt | Arbitrary size integer math perl package | |

p5-Math-BigInt-GMP | Perl module for arbitrary size integer math via the GMP library | |

p5-Math-BigInt-Pari | Perl5 library to use Math::Pari for Math::BigInt routines | |

p5-Math-BigInteger | Arbitrary length integer extension module for Perl | |

p5-Math-Calc-Units | Human-readable unit-aware calculator | |

p5-Math-Complex | Complex numbers and associated mathematical functions | |

p5-Math-Derivative | Numeric 1st and 2nd order differentiation | |

p5-Math-FFT | Perl module to calculate Fast Fourier Transforms | |

p5-Math-FixedPrecision (V) | Perl module that provides decimal math without floating point errors | |

p5-Math-GMP | Perl 5 module for high speed arbitrary size integer math | |

p5-Math-Gauss (V) | Perl module for Gaussian probability distribution | |

p5-Math-Int128 | Manipulate 128 bits integers in Perl | |

p5-Math-Int64 | Manipulate 64 bits integers in Perl | |

p5-Math-Interpolate | Perl module for interpolating data | |

p5-Math-Matrix | Math::Matrix - Multiply and invert Matrices | |

p5-Math-MatrixReal | Perl module for performing operations on real matrices | |

p5-Math-Pari | Perl5 interface to the pari math library | |

p5-Math-Permute-List | Permute a list | |

p5-Math-Prime-Util | Perl5 utilities related to prime numbers | |

p5-Math-Random | Random number generators | |

p5-Math-Random-ISAAC | Perl interface to the ISAAC PRNG algorithm | |

p5-Math-Random-ISAAC-XS | C implementation of the ISAAC PRNG algorithm for Perl modules | |

p5-Math-Random-MT | The Mersenne Twister PRNG | |

p5-Math-Random-MT-Auto | Auto-seeded Mersenne Twister PRNGs | |

p5-Math-Random-MT-Perl | Pure Perl Mersenne Twister Random Number Generator | |

p5-Math-Round | Perl extension for rounding numbers | |

p5-Math-Spline | Cubic Spline Interpolation of data | |

p5-Math-Systems | Solve simultaneous equation | |

p5-Math-Utils | Useful mathematical functions not in Perl | |

p5-Math-VecStat | Some basic numeric stats on vectors | |

p5-Number-Compare | Compiles a simple comparison to an anonymous subroutine | |

p5-Number-Latin | Perl module for lower/upper-latin numbering system | |

p5-Number-Range | Define ranges and test if number is in range | |

p5-Number-Tolerant | Perl5 module for tolerance ranges for inexact numbers | |

p5-Number-WithError | Numbers with error propagation and scientific rounding | |

p5-PDL (V) | PDL turns perl in to a free, array-oriented, numerical language | |

p5-Roman | Conversion of numeric notation between Roman and Arabic | |

p5-Set-Crontab | Perl module to parse crontab(5)-like lists of integers | |

p5-Set-Infinite | Perl module for sets of integers and objects | |

p5-Spreadsheet-ParseExcel | Perl module to get information from an Excel file | |

p5-Spreadsheet-Read | Perl 5 module to read the data from a spreadsheet | |

p5-Spreadsheet-ReadSXC | Perl 5 module to extract OpenOffice 1.x spreadsheet data | |

p5-Spreadsheet-WriteExcel | Create Excel data files | |

p5-Spreadsheet-XLSX | Perl 5 module to read MS Excel 2007 files | |

p5-Statistics-CaseResampling | Efficient resampling and calculation of medians with confidence intervals | |

p5-Statistics-Descriptive | Perl module of basic descriptive statistical functions | |

p5-Statistics-Distributions | Perl module of computations with distributions | |

p5-Statistics-TTest | Perl module of confidence interval computation using T-Tests | |

p5-Test-Number-Delta | Compare the difference between numbers against a given tolerance | |

pari | Software package for computer-aided number theory | |

pari-galdata | Galois group data for pari | |

pari23 | Software package for computer-aided number theory (2.3 version) | |

pcg | Random number generator | |

pear-Math_BigInteger | Provides base-2, base-10, base-16, and base-256 numbers | |

pear-Numbers_Roman | Provides methods for converting to and from Roman Numerals | |

pear-Numbers_Words | Provides methods for spelling numerals in words | |

pear-Spreadsheet_Excel_Writer (V) | Package for generating Excel spreadsheets | |

php-bcmath | PHP extension for bc-style arbitrary precision math | |

php-gmp (V) | PHP extension for arbitrary precision math | |

php-stats | PHP extension for statistical computation | |

ppl | The Parma Polyhedra Library | |

prng | Portable, high-performance ANSI-C pseudorandom number generators | |

pspp | Program for statistical analysis of sampled data | |

py-EMpy (V) | Suite of numerical algorithms widely used in electromagnetism | |

py-Numeric | Adds multidimensional numeric arrays to Python | |

py-Scientific | Python modules for scientific computing | |

py-Scientific-doc | Python modules for scientific computing | |

py-Theano | Optimizing compiler for evaluating mathematical expressions | |

py-abcpmc | Approximate Bayesian Computation Population Monte Carlo | |

py-aerocalc (V) | Aeronautical Engineering Calculations | |

py-aesthete (V) | Integrated mathematics environment | |

py-aipy (V) | Astronomical Interferometry in Python | |

py-alg3dpy (V) | 3D Algebra in Python | |

py-algebraic (V) | Algebraic modeling system for Python | |

py-algopy (V) | ALGOPY: Taylor Arithmetic Computation and Algorithmic Differentiation | |

py-almost | Python module to compare two numbers generously | |

py-anfft (V) | FFT package for Python, based on FFTW | |

py-annarchy (V) | Artificial Neural Networks architect | |

py-applpy (V) | ApplPy is a computational probability package written in Python | |

py-asteval | Safe, minimalistic expression evaluator using ast module | |

py-astlib (V) | Set of python modules for producing simple plots, statistics | |

py-astropysics (V) | Astrophysics libraries for Python | |

py-autograd | Efficiently computes derivatives of numpy code | |

py-bip (V) | Python package for object-oriented bayesian inference | |

py-bitarray (V) | Efficient arrays of booleans -- C extension | |

py-blaze (V) | NumPy and Pandas interface to Big Data | |

py-bottleneck | Collection of fast NumPy array functions written in C | |

py-brian (V) | Simulator for spiking neural networks | |

py-bxa (V) | Bayesian X-ray spectral analysis | |

py-cbc (V) | Gravitational wave CBC analysis toolkit | |

py-cdecimal | Arbitrary precision decimal floating point arithmetic | |

py-cf-python (V) | Python interface to the CF data model | |

py-chainer (V) | Flexible framework of neural networks | |

py-chaintipy (V) | CHIANTI atomic database for astrophysical spectroscopy | |

py-chebpy (V) | Chebyshev polynomial based spectral methods of PDEs | |

py-checkmate (V) | Tool to easily test simulated event files against LHC results | |

py-chompack (V) | Library for chordal matrix computations | |

py-claripy | Abstraction layer for constraint solvers | |

py-clnum (V) | Rational and arbitrary precision floating point numbers | |

py-cma (V) | Covariance Matrix Adaptation Evolution Strategy for non-linear | |

py-corrfitter (V) | Utilities for fitting correlators in lattice QCD | |

py-csa (V) | The Connection-Set Algebra implemented in Python | |

py-cvxpy (V) | Python software for convex optimization | |

py-cxnet (V) | Complex networks in education | |

py-cxvpy (V) | DSL for modeling convex optimization problems in Python | |

py-cythongsl (V) | Cython declarations for the Gnu Scientific Library | |

py-da (V) | Pyda is a general object-oriented data assimilation package | |

py-dana (V) | Framework for distributed, asynchronous and adaptive computing | |

py-dclab (V) | Data analysis for real-time deformability cytometry | |

py-debacl (V) | Density-Based Clustering | |

py-decimalfp (V) | Decimal fixed-point arithmetic | |

py-decimalpy (V) | Decimal based version of numpy | |

py-delay (V) | Python tool for solving delay differential equations | |

py-delny (V) | Python module for delaunay triangulation | |

py-deltasigma (V) | Scale and map to implementable topologies delta sigma modulators | |

py-descartes (V) | Use geometric objects as matplotlib paths and patches | |

py-digraphtools (V) | Python library for working with directed acyclic graphs | |

py-dimarray (V) | Numpy array with labelled dimensions and axes, dimension | |

py-django-mathjax (V) | MathJax easy integration with django | |

py-dubins (V) | Code to generate and manipulate dubins curves | |

py-easymodeler (V) | Simple ODE Tools for Modelers | |

py-ecspy (V) | Framework for creating evolutionary computations in Python | |

py-eigency (V) | Cython interface between the numpy arrays and the Matrix/Array | |

py-emmsa (V) | Multivariate Statistical Analysis for Electron Microscopy Data | |

py-ephem | Scientific-grade astronomical computations for Python | |

py-epipy (V) | Python tools for epidemiology | |

py-fanova (V) | Functional ANOVA | |

py-fdm (V) | Framework for solving PDEs with FDM using Python | |

py-ffc (V) | C++ code generator for multilinear forms | |

py-fftw | Python bindings to the FFTW3 C-library | |

py-fiat (V) | Finite element Automatic Tabulator | |

py-fitsarray (V) | Ndarray subclass with a fits header | |

py-flipper (V) | Manipulating curves and measured laminations on surfaces | |

py-fluiddyn (V) | Framework for studying fluid dynamics. | |

py-fnss (V) | Fast creation and configuration of topologies, traffic matrices | |

py-formex (V) | Tool to generate and manipulate complex 3D geometries | |

py-fpconst | IEEE 754 floating point special handling for Python | |

py-fssa (V) | Package for finite-size scaling analysis at phase transitions | |

py-fwarp (V) | Tool to wrap Fortran 77/90/95 code in C, Cython &amp; Python | |

py-gammafit (V) | Derivation of non-thermal particle distributions MCMC spectraly | |

py-gato (V) | Python-based toolbox to visualise algorithms on graphs | |

py-geom (V) | Basic Vector Geometry Package for Python | |

py-gmpy | Python library for arbitrary precision arithmetic | |

py-gmpy2 (V) | GMP/MPIR, MPFR, and MPC interface to Python 2.6+ and 3.x | |

py-goreutilities (V) | Some utility functions useful for GoreLab members | |

py-gosam (V) | Automated One-Loop matrix element generator | |

py-goulib (V) | Library of useful Python code for scientific + technical applications | |

py-griddata (V) | Interpolate irregularly spaced data to a grid | |

py-grpy (V) | Small GR-oriented package which uses sympy | |

py-gts (V) | Python bindings for GNU Triangulated Surface Library | |

py-gvar (V) | Utilities for manipulating Gaussian random variables | |

py-halp (V) | Hypergraph Algorithms Package | |

py-hamilton (V) | Visualize and control mechanic systems through solving these systems | |

py-hcluster (V) | Hierarchical Clustering Package For Scipy | |

py-hddm (V) | Hierarchical Bayesian estimation of Drift Diffusion Models | |

py-healpy (V) | Healpix tools package for Python | |

py-hessianfree (V) | Hessian-free optimization for deep networks | |

py-hmf (V) | Halo mass function calculator | |

py-hyperbolic (V) | Python library for generating hyperbolic geometry | |

py-hyperspy (V) | Multidimensional data analysis toolbox | |

py-icane (V) | Python wrapper for ICANE Statistical Data and Metadata API | |

py-igraph (V) | Manipulating Undirected and Directed Graphs for Python | |

py-imreg-dft (V) | Image registration utility using discrete Fourier transform | |

py-infinity | All-in-one infinity value for Python | |

py-intervals | Tools for handling intervals (ranges of comparable objects) | |

py-irco (V) | International Research Collaboration Graphs | |

py-jbessel (V) | Bessel functions of the first kind written in Cython | |

py-jelly (V) | Abstraction layer for running numerical hydrodynamics software | |

py-kabuki (V) | Easy creation of hierarchical bayesian models | |

py-kiwisolver | Fast implementation of the Cassowary constraint solver | |

py-krylov (V) | Python package implementing common Krylov methods | |

py-krypy (V) | Krylov subspace methods for linear systems | |

py-lapack (V) | PyLapack is a python interface to LAPACK | |

py-larry (V) | Label the rows, columns, any dimension, of your NumPy arrays | |

py-lds (V) | Learning and inference for Gaussian linear dynamical systems | |

py-lea (V) | Discrete probability distributions in Python | |

py-lempel-Ziv_Complexity (V) | Lempel-Ziv complexity for a binary sequence, in naive Python code | |

py-lifelines (V) | Including Kaplan Meier, Nelson Aalen and regression | |

py-linop (V) | Pythonic abstraction for linear mathematical operators | |

py-liveplots (V) | Real-time live plot server | |

py-lmfit | Least-squares minimization with bounds and constraints | |

py-louvain (V) | Methods of community detection in large networks | |

py-lscsoft-glue (V) | Grid LSC User Environment | |

py-lsqfit (V) | Utilities for nonlinear least-squares fits | |

py-math-braid (V) | Pure python braid group implementation based on sympy | |

py-math-snappy (V) | Program for studying the topology and geometry of 3-manifolds | |

py-math3d (V) | 3D Special Euclidean mathematics package for Python | |

py-mathjspy (V) | Evaluate mathematical expressions in the same manner as MathJS | |

py-mave (V) | Library for Measurement and Verification | |

py-mcerp (V) | Real-time latin-hypercube-sampling-based Monte Carlo Error Propagation | |

py-mcint (V) | Simple tool to perform numerical integration using MC techniques | |

py-mcview (V) | 3D/graph event viewer for high-energy physics event simulations | |

py-mdp (V) | Modular toolkit for data processing | |

py-model-builder (V) | Graphical ODE simulator | |

py-mpmath | Python library for arbitrary-precision FP arithmetic | |

py-mpop (V) | Meteorological post processing package | |

py-msdas (V) | Mass Spectrometry analysis | |

py-msumastro (V) | Process FITS files | |

py-munkres | Munkres algorithm for the Assignment Problem | |

py-myfitter (V) | Maximum Likelihood Fits in Python | |

py-ncomb (V) | Python combinatorics library | |

py-ncpol2sdpa (V) | Converter from noncommutative variables to sparse SDPA | |

py-networkx | Python package for creating and manipulating graphs and networks | |

py-neurolab (V) | Simple and powerfull neural network library for python | |

py-nfg (V) | Python package for implementing and solving Network form games | |

py-nimfa (V) | Python Library for Nonnegative Matrix Factorization Techniques | |

py-nodepy (V) | Numerical ODE solvers in Python | |

py-noise | Perlin noise for Python | |

py-nphelper (V) | Convenient numpy helper functions | |

py-nptdms (V) | NumPy based module for reading TDMS files produced by LabView | |

py-nsim (V) | Simulate systems from ODEs or SDEs, analyze time series | |

py-numarray | Array manipulation | |

py-numba | NumPy aware dynamic Python compiler using LLVM | |

py-numdifftools (V) | Tools for automatic numerical differentiation | |

py-numexpr | Numerical expression evaluator for NumPy | |

py-numpy | Array processing for numbers, strings, records, and objects | |

py-numpydoc (V) | Sphinx extension to support docstrings in Numpy format | |

py-nzmath (V) | Number theory oriented calculation system | |

py-odeint (V) | Python binding for odeint from boost | |

py-openopt (V) | Python module for numerical optimization | |

py-opentmm (V) | OpenTMM is an object-oriented electrodynamic S-matrix | |

py-pandas | Python Data Analysis Library | |

py-pandas-datareader | Remote data access for pandas | |

py-parakeet (V) | Runtime compiler for numerical Python | |

py-patsy | Python package for describing statistical models | |

py-pebl (V) | Python Environment for Bayesian Learning | |

py-poppy (V) | Physical optics propagation for optical simulations | |

py-powerlaw | Toolbox for analysis of heavy-tailed distributions | |

py-pulp (V) | LP modeler in Python | |

py-pyamg (V) | Algebraic multigrid solvers in Python | |

py-pydy (V) | Python tool kit for multi-body dynamics | |

py-pyflation (V) | Calculating cosmological perturbations during an inflationary | |

py-pykit-shared (V) | Collection of modules shared amongst my other projects | |

py-pylith (V) | Finite element code for solving dynamic and quasi-static tectonic deformation problems | |

py-pymc (V) | Markov Chain Monte Carlo sampling toolkit | |

py-pymc3 | Bayesian modeling and probabilistic machine learning | |

py-pypedal (V) | Tools for pedigree analysis | |

py-pyrr (V) | 3D mathematical functions using NumPy | |

py-pysal (V) | Python Spatial Analysis Library | |

py-pyslha (V) | Parsing, manipulating, and visualising SUSY Les Houches Accord data | |

py-pythics (V) | Python Instrument Control System | |

py-pywavelets | Discrete Wavelet Transforms in Python | |

py-qmath (V) | Provides a class for deal with quaternion algebra and 3D rotation | |

py-quadprog | Solver for a strictly convex quadratic program | |

py-quaternionarray (V) | Python package for fast quaternion arrays math | |

py-qutip (V) | Quantum Toolbox in Python | |

py-rasterio (V) | Fast and direct raster I/O for Python programmers who use Numpy | |

py-rogues (V) | Python and numpy port of Nicholas Higham's m*lab test matrices | |

py-roman | Integer to Roman numerals converter for Python | |

py-rpy | R interface for Python | |

py-ruffus (V) | Lightweight python module to run computational pipelines | |

py-scikit-image | Image processing routines for SciPy | |

py-scikit-learn | Machine learning algorithms for Python | |

py-scikits-bvp_solver (V) | Python package for solving two-point boundary value problems | |

py-scikits_ann (V) | Approximate Nearest Neighbor library wrapper for Numpy | |

py-scikits_optimization (V) | Python module for numerical optimization | |

py-scikits_talkbox (V) | Talkbox, a set of python modules for speech/signal processing | |

py-scikits_timeseries (V) | Time series manipulation | |

py-scikits_vectorplot (V) | Vector fields plotting algorithms | |

py-scimath (V) | Scientific and Mathematical calculations | |

py-scipy | Scientific Algorithms Library for Python | |

py-scitools (V) | Python library for scientific computing | |

py-scs (V) | Scs: splittling cone solver | |

py-sdt_metrics (V) | Signal Detection Theory (SDT) metrics for Python | |

py-se (V) | Framework for solving PDEs with FDM using Python | |

py-seeds (V) | Stochastic Ecological and Evolutionary Dynamics System | |

py-sempy (V) | Python implementation of the spectral element method | |

py-sfepy (V) | Simple finite elements in Python | |

py-shapely (V) | Geometric objects, predicates, and operations | |

py-simpleeval | Simple, safe single expression evaluator library | |

py-simpy (V) | Discrete event simulation framework | |

py-simulators (V) | Tools to build an instrument model | |

py-solpy (V) | Solar Performance and Design library | |

py-sparce (V) | Sparse linear algebra extension for Python | |

py-speview (V) | Program to display binary SPE files containing Raman spectra | |

py-spfpm (V) | Tools for arithmetic on fixed-point (binary) numbers | |

py-sphviewer (V) | Framework for rendering particle simulations | |

py-statsmodels | Statistical computations and models for use with SciPy | |

py-sunpy (V) | Python for Solar Physicists | |

py-swiginac (V) | Interface to GiNaC, providing Python with symbolic mathematics | |

py-sym2num (V) | Sympy to numpy code generator | |

py-sympy | Python library for symbolic mathematics | |

py-sympycore (V) | SympyCore an efficient pure Python Computer Algebra System | |

py-t3m (V) | Tinker toys for topologists | |

py-tables | Database package for large amounts of data | |

py-teafiles (V) | Time Series storage in flat files | |

py-tensorboard | Web applications for inspecting TensorFlow runs and graphs | |

py-thLib (V) | Collection of Python utilities for signal analysis | |

py-traces (V) | Library for unevenly-spaced time series analysis | |

py-uncertainties (V) | Support for physical quantities with units, based on numpy | |

py-utilib_common (V) | Commonly used PyUtilib data and methods | |

py-utilib_component_app (V) | Application interface for the PyUtilib Component Architecture | |

py-utilib_component_config (V) | Extensions for configuring components in PyUtilib | |

py-utilib_component_executables (V) | PyUtilib plugin for managing executables | |

py-utilib_component_loader (V) | PyUtilib plugins for loading external packages | |

py-utilib_enum (V) | Variant of the 'enum' package that supports pickling | |

py-utilib_math (V) | PyUtilib math utilities | |

py-vespa (V) | Calculate astrophysical false positive probabilities | |

py-vo (V) | Python based tools to parse/write VOTABLE file | |

py-wafo (V) | Statistical analysis and simulation of random waves and random loads | |

py-xcal-raman (V) | Module for x-axis calibration of Raman spectrometers | |

py-z3 | Python bindings for the Z3 theorem prover / SMT solver | |

py-z3solver | Theorem prover from Microsoft Research | |

qalculate | Modern multi-purpose desktop calculator (console version) | |

qalculate-bases | Utility for conversion between number bases using Qalculate | |

qalculate-currency | Utility for conversion between currencies using Qalculate | |

qalculate-gtk | Modern multi-purpose desktop calculator (GNOME version) | |

qalculate-units | Utility for conversion between units using Qalculate | |

qhull | Computing the convex hull | |

quadpack | Fortran subroutines for the solution of definite univariate integrals | |

randlib | Library of C Routines for Random Number Generation | |

ranger | Fast Implementation of Random Forests | |

ruby-gsl | Ruby interface to GNU Scientific Library | |

ruby-narray | N-dimensional Numerical Array class for Ruby | |

ruby-roo | Ruby library to read and write Spreadsheet Documents | |

ruby-roo-xls (V) | Add support for legacy Excel file standards to math/ruby-roo | |

ruby-spreadsheet | Ruby Spreadsheet Library to read and write Spreadsheet Documents | |

sc | Curses-based spreadsheet program | |

sc-im | Curses-based spreadsheet program based on sc | |

scilab | High-level scientific math programming environment with graphics | |

siag (V) | Poor man's office suite with spreadsheet, word processor, etc | |

simgrid (V) | Simulator of distributed applications | |

slatec | Library of mathematical and statistical Fortran 77 subroutines | |

snns | Software simulator for neural networks | |

speedcrunch | Calculator | |

stan-math | Stan Math library | |

statist | Small and portable statistics program | |

sundials | Suite of nonlinear and differential/algrbraic equation solvers | |

superlfv (V) | Calculate lepton flavor violating observables | |

superlu | ANSI C routine library for the solution of sparse linear systems | |

svmlin | Fast Linear SVM Solvers for Supervised and Semi-supervised Learning | |

tasp-vsipl | Vector Signal Image Processing Library | |

teapot | Curses based spread sheet program | |

tex-apnum | Arbitrary precision numbers implemented by TeX macros | |

tex-apnum-doc | Documentation for tex-apnum | |

tex-fp | Fixed point arithmetic | |

tex-fp-doc | Documentation for tex-fp | |

tex-kastrup | Expansible conversion into binary-based number systems | |

tex-kastrup-doc | Documentation for tex-kastrup | |

tex-mathpartir | Typesetting sequences of math formulas, e.g. type inference rules | |

tex-mathpartir-doc | Documentation for tex-mathpartir | |

tex-mathspec | Specify arbitrary fonts for mathematics in XeTeX | |

tex-mathspec-doc | Documentation for tex-mathspec | |

tex-tikz-cd (V) | Create commutative diagrams with TikZ | |

tex-tikz-cd-doc (V) | Documentation for tex-tikz-cd | |

tex-unicode-math | Unicode mathematics support for XeTeX and LuaTeX | |

tex-unicode-math-doc | Documentation for tex-unicode-math | |

texdrive | Emacs mode for creating inline formulae for HTML | |

tochnog | Finite Element Analysis Program | |

udunits | Library and program for manipulating units of physical quantities | |

units | GNU Units - a calculator capable of performing unit conversions | |

vista | Visual statistics system | |

vowpal_wabbit | Vowpal Wabbit is a machine learning system | |

wxmaxima | Graphical UI for maxima | |

xeukleides10 | X-Frontend for A Euclidean geometry drawing language | |

xfractint | Fractint for X11 | |

xgap | GUI for GAP | |

xldlas | XForms-based statistics package | |

xlife | John Horton Conway's Game of Life | |

xlispstat | Statistics/X11-based LISP interpreter | |

xmgr | Powerful XY plotting tool for workstations or X-terminals using X | |

xylib | Library for reading powder diffraction data | |

yacas | Yet Another Computer Algebra System | |

yorick | Numerical algebra system (similar to Matlab) | |

z3 | The Z3 theorem prover / SMT solver |