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./wip/cufflinks, Transcript assembly, differential expression, regulation for RNA-Seq

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Branch: CURRENT, Version: 2.1.1, Package name: cufflinks-2.1.1, Maintainer: dsiercks

[description of the port]

Required to run:
[devel/boost-libs] [wip/samtools0119] [lang/python37]

Required to build:
[devel/boost-headers] [devel/boost-jam] [math/eigen3] [pkgtools/cwrappers]

Master sites:

http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/ (Download)

SHA1: 9c5bf3d3872e8dd358ba7d7407644ab2cbbfdcb6
RMD160: 4a612f98be24d7d31520be0501f1f4bcd3e76e0f
Filesize: 689.385 KB

Version history: (Expand)

(2020-09-29) Package deleted from pkgsrc
(2020-01-02) Package has been reborn
(2019-12-17) Package deleted from pkgsrc
(2019-12-15) Package has been reborn
(2019-12-14) Package deleted from pkgsrc
(2019-06-25) Package has been reborn

CVS history: (Expand)

2014-09-04 23:51:02 by Jason Bacon | Files touched by this commit (5)

Log message:
Import cufflinks-2.2.1 as wip/cufflinks.

Cufflinks assembles transcripts, estimates their abundances, and tests for
differential expression and regulation in RNA-Seq samples.

WWW: http://port.home.page/