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CVS Commit History:
2023-10-28 22:39:31 by Jason Bacon | Files touched by this commit (3) |
Log message:
biology/vcf-split: Update to 0.1.5.10
Updates for new libxtend API
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2022-12-28 16:27:18 by Jason Bacon | Files touched by this commit (20) |
Log message:
Change MAINTAINER= to OWNER= on mission-critical packages
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2022-12-11 22:18:27 by Jason Bacon | Files touched by this commit (3) |
Log message:
biology/vcf-split: Update to 0.1.5.4
Update for biolibc API changes
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2022-06-11 21:46:43 by Jason Bacon | Files touched by this commit (3) |
Log message:
biology/vcf-split: Update to 0.1.5
Use latest biolibc API
Minor build system improvements
https://github.com/auerlab/vcf-split/releases
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2022-03-15 22:12:52 by Jason Bacon | Files touched by this commit (3) | |
Log message:
biology/vcf-split: Update to 0.1.4
Minor update for biolibc 0.2.2 API changes
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2021-12-14 20:10:43 by Jason Bacon | Files touched by this commit (3) |
Log message:
biology/vcf-split: Update to 0.1.3.3
Transfer header from multi-sample input
Updates for evolving libxtend and biolibc APIs
Add --version flag
Numerous minor fixes and enhancements
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2021-10-26 12:03:45 by Nia Alarie | Files touched by this commit (73) |
Log message:
biology: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and
SHA512 hashes
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2021-10-07 15:19:44 by Nia Alarie | Files touched by this commit (73) |
Log message:
biology: Remove SHA1 hashes for distfiles
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2021-06-11 19:22:40 by Jason Bacon | Files touched by this commit (3) |
Log message:
biology/vcf-split: Update to 0.1.2
Updates for new biolibc API
Upstream change log: https://github.com/auerlab/vcf-split/releases
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2021-03-24 16:22:29 by Jason Bacon | Files touched by this commit (4) |
Log message:
biology/vcf-split: import vcf-split-0.1.1
Vcf-split splits a multi-sample VCF into single-sample VCFs, writing thousands
of output files simultaneously. Parsing the TOPMed human chromosome 1 BCF
with bcftools takes two days, so extracting the 137,977 samples one at a time
or using thousands of parallel readers of the same file is impractical.
Vcf-split solves this by generating thousands of single-sample outputs during
a single sweep through the multi-sample input.
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