20210503 19:55:02 by Adam Ciarcinski  Files touched by this commit (2)  
Log message:
pyscipy: updated to 1.6.3
Issues closed for 1.6.3

* Divide by zero in distance.yule
* prerelease_deps failures
* spatial rotation failure in (1.6.3) wheels repo (ARM64)
Pull requests for 1.6.3

* fix the matplotlib warning emitted during builing docs
* Divide by zero in yule dissimilarity of constant vectors
* deprecated np.typeDict
* substitute np.math.factorial with math.factorial
* add random seeds in Rotation module

20210420 23:39:25 by Dr. Thomas Orgis  Files touched by this commit (1) 
Log message:
math/pyscipy: drop direct BLAS dependency, used via math/pynumpy

20210409 16:41:35 by Tobias Nygren  Files touched by this commit (14) 
Log message:
revert wrong fix for pyscipy python 3.6 deprecation, fix properly

20210406 15:11:17 by Nia Alarie  Files touched by this commit (1) 
Log message:
pyscipy: unbreak bulk builds
if you mark a package incompatible with python version X, you also
need to mark any dependent packages incompatible with version X

20210406 11:00:42 by Patrick Welche  Files touched by this commit (1)  
Log message:
pyscipy: ride update and chmod some files to avoid PKG_DEVELOPER warnings

20210405 21:26:07 by Tobias Nygren  Files touched by this commit (3)  
Log message:
pyscipy: update to 1.6.2
Highlights of this release
scipy.ndimage improvements: Fixes and ehancements to boundary extension
modes for interpolation functions. Support for complexvalued inputs in many
filtering and interpolation functions. New grid_mode option for
scipy.ndimage.zoom to enable results consistent with scikitimage's
rescale.
scipy.optimize.linprog has fast, new methods for large, sparse problems
from the HiGHS library.
scipy.stats improvements including new distributions, a new test, and
enhancements to existing distributions and tests
Deprecated features
scipy.spatial changes
Calling KDTree.query with k=None to find all neighbours is deprecated.
Use KDTree.query_ball_point instead.
distance.wminkowski was deprecated; use distance.minkowski and supply
weights with the w keyword instead.
Backwards incompatible changes
Using scipy.fft as a function aliasing numpy.fft.fft was removed after
being deprecated in SciPy 1.4.0. As a result, the scipy.fft submodule
must be explicitly imported now, in line with other SciPy subpackages.
scipy.signal changes
The output of decimate, lfilter_zi, lfiltic, sos2tf, and
sosfilt_zi have been changed to match numpy.result_type of their inputs.
The window function slepian was removed.
The frechet_l and frechet_r distributions were removed.

20201012 23:52:05 by Jason Bacon  Files touched by this commit (87)  
Log message:
math/blas, math/lapack: Install interchangeable BLAS system
Install the new interchangeable BLAS system created by Thomas Orgis,
currently supporting Netlib BLAS/LAPACK, OpenBLAS, cblas, lapacke, and
Apple's Accelerate.framework. This system allows the user to select any
BLAS implementation without modifying packages or using package options, by
setting PKGSRC_BLAS_TYPES in mk.conf. See mk/blas.buildlink3.mk for details.
This commit should not alter behavior of existing packages as the system
defaults to Netlib BLAS/LAPACK, which until now has been the only supported
implementation.
Details:
Add new mk/blas.buildlink3.mk for inclusion in dependent packages
Install compatible Netlib math/blas and math/lapack packages
Update math/blas and math/lapack MAINTAINER approved by adam@
OpenBLAS, cblas, and lapacke will follow in separate commits
Update direct dependents to use mk/blas.buildlink3.mk
Perform recursive revbump

20200804 03:16:19 by Tobias Nygren  Files touched by this commit (3)  
Log message:
pyscipy: update to 1.5.2
Done to fix build w/ gfortran 10. "make test" was mostly OK except for
three tests that returned nan where inf was expected ...
Highlights of this release:
wrappers for more than a dozen new LAPACK routines are now available
in scipy.linalg.lapack
Improved support for leveraging 64bit integer size from linear algebra
backends
addition of the probability distribution for twosided onesample
KolmogorovSmirnov tests
New features:
Too many; see release notes at github.
Backwards incompatible changes:
The output signatures of ?syevr, ?heevr have been changed from
w, v, info to w, v, m, isuppz, info
The order of output arguments w, v of <sy/he>{gv, gvd, gvx} is
swapped.
The output length of scipy.signal.upfirdn has been corrected, resulting
outputs may now be shorter for some combinations of up/down ratios and
input signal and filter lengths.
scipy.signal.resample now supports a domain keyword argument for
specification of time or frequency domain input.

20200428 11:45:27 by Adam Ciarcinski  Files touched by this commit (3)  
Log message:
pyscipy: updated to 1.4.1
SciPy 1.4.1 is a bugfix release with no new features
compared to 1.4.0. Importantly, it aims to fix a problem
where an older version of pybind11 may cause a segmentation
fault when imported alongside incompatible libraries.
SciPy 1.4.0 is the culmination of 6 months of hard work. It contains
many new features, numerous bugfixes, improved test coverage and better
documentation. There have been a number of deprecations and API changes
in this release, which are documented below. All users are encouraged to
upgrade to this release, as there are a large number of bugfixes and
optimizations. Before upgrading, we recommend that users check that
their own code does not use deprecated SciPy functionality (to do so,
run your code with ``python Wd`` and check for ``DeprecationWarning`` s).
Our development attention will now shift to bugfix releases on the
1.4.x branch, and on adding new features on the master branch.

20191104 18:47:31 by Roland Illig  Files touched by this commit (14) 
Log message:
mk: make BROKEN a list of lines, like PKG_FAIL_REASON
Packages defined the variable BROKEN inconsistently. Some added quotes,
like they are required in PKG_FAIL_REASON, some omitted them.
Now all packages behave the same, and pkglint will flag future mistakes.
