./biology/biolibc-tools, High-performance bioinformatics tools based on biolibc

[ CVSweb ] [ Homepage ] [ RSS ] [ Required by ] [ Add to tracker ]

Branch: CURRENT, Version: 0.1.4.13, Package name: biolibc-tools-0.1.4.13, Maintainer: bacon

Biolibc-tools is a collection of simple, fast, and memory-efficient
programs for processing biological data. These programs built on
biolibc are not complex enough to warrant separate projects.

Master sites:

Version history: (Expand)

CVS history: (Expand)


   2023-12-21 09:50:25 by Niclas Rosenvik | Files touched by this commit (1) 
Log message:
biolibc-tools: fix installation of manpages for users of a custom PKGMANDIR
   2023-10-29 23:58:03 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/biolibc-tools: Update to 0.1.4.13

Updates for new libxtend API
   2023-08-12 16:51:02 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/biolibc-tools: Update to 0.1.4.9

Updates for biolibc GFF3 API changes
   2023-06-14 20:43:34 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/biolibc-tools: Update to 0.1.4.6

Improvements to deromanize
Updates for libxtend API changes
   2023-05-21 14:20:46 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/biolibc-tools: Update to 0.1.4.3

deromanize: Take optional input filename, improve robustness
   2022-12-28 16:27:18 by Jason Bacon | Files touched by this commit (20) 
Log message:
Change MAINTAINER= to OWNER= on mission-critical packages
   2022-12-14 01:23:19 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/biolibc-tools: Update to 0.1.4.1

deromanize:

Check for NULL field to prevent crash in some situations
Take optional input file as second argument
   2022-12-13 01:53:43 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/biolibc-tools: Update to 0.1.4

Add deromanize subcommand to convert Roman numeral chromosome IDs
fastx-stats: Report standard deviation for read length

Changes:    https://github.com/auerlab/biolibc-tools/releases