./biology/peak-classifier, Classify ChIP/ATAC-Seq peaks based on features provided in a GFF

[ CVSweb ] [ Homepage ] [ RSS ] [ Required by ] [ Add to tracker ]

Branch: CURRENT, Version: 0.1.4.13, Package name: peak-classifier-0.1.4.13, Maintainer: bacon

Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
Peaks are provided in a BED file sorted by chromosome and position.
The GFF must be sorted by chromosome and position, with gene-level
features separated by ### tags and each gene organized into
subfeatures such as transcripts and exons. This is the default
for common data sources.

Master sites:

Version history: (Expand)

CVS history: (Expand)


   2023-10-28 22:37:17 by Jason Bacon | Files touched by this commit (4) 
Log message:
biology/peak-classifier: Update to 0.1.4.13

Updates for new libxtend API
   2023-08-14 07:25:36 by Thomas Klausner | Files touched by this commit (1247) 
Log message:
*: recursive bump for Python 3.11 as new default
   2023-08-12 16:52:46 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/peak-classifier: Update to 0.1.4.11

Updates for biolibc GFF3 API changes
   2023-06-14 20:48:54 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/peak-classifier: Update to 0.1.4.8

Updates for libxtend API
Minor fixes
   2022-12-28 16:27:18 by Jason Bacon | Files touched by this commit (20) 
Log message:
Change MAINTAINER= to OWNER= on mission-critical packages
   2022-12-11 22:16:47 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/peak-classifier: Update to 0.1.4-5

Update for biolibc API changes
   2022-06-30 13:19:02 by Nia Alarie | Files touched by this commit (524) 
Log message:
*: Revbump packages that use Python at runtime without a PKGNAME prefix
   2022-06-11 21:52:58 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/peak-classifier: Update to 0.1.4

Update for bl_gff_t API streamlining
https://github.com/auerlab/peak-classifier/releases