arka | | Graphic interface for the programs from the GP package |
azara | | Programs to process and view NMR data |
bioperl | | Perl tools for computational molecular biology |
bodr | | Blue Obelisk Data Repository |
chemical-mime-data | | Chemical mime and file type support for desktops |
chemtool | | Program for drawing organic molecules |
clustalw | | General purpose multiple alignment program for DNA or proteins |
coalesce | | Estimates effective population size and mutation rate |
fastDNAml | | Program derived from Joseph Felsenstein's version 3.3 DNAML |
fluctuate | | Estimation of population growth rate |
genesplicer | | Computational Method for Splice Site Prediction |
glimmer | | System for finding genes in microbial DNA |
gnome-chemistry-utils | | GChemPaint, a 2D chemical editor and other programs |
gp | | Manipulate DNA/RNA sequence in a Unix fashion |
gromacs | | Molecular dynamics package |
hmmer | | Implementation of profile HMM software for protein sequence analysis |
lucy | | Sequence Cleanup Program |
mopac | | Molecular energy calculation program |
mummer | | System for aligning whole genome sequences |
nut | | Record what you eat and analyze your meals |
openbabel | | Chemistry file translation program |
pdbalign | | Prediction of Protein Secondary Structure and Active Sites |
phylip | | Phylogeny Inference Package |
plink | | Whole-genome association analysis toolset |
primer3 | | Design PCR primers |
profit | | Performs least squares fits of two protein structures |
puzzle | | Maximum likelihood analysis of molecular sequence data |
py-mol | | Molecular Visualization System |
rasmol | | Molecular Graphics Visualisation Tool |
sewer | | SEquence Analysis using WEb Resources |
stride | | Protein secondary structure assignment from atomic coordinates |
xylem | | Tools for manipulation of genetic databases |