Subject: CVS commit: pkgsrc/biology/canu
From: Jason Bacon
Date: 2019-01-07 03:33:17
Message id: 20190107023317.8F449FB16@cvs.NetBSD.org

Log Message:
biology/canu: import canu-1.8

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule
sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

    Detect overlaps in high-noise sequences using MHAP

    Generate corrected sequence consensus

    Trim corrected sequences

    Assemble trimmed corrected sequences

Files:
RevisionActionfile
1.1addpkgsrc/biology/canu/distinfo
1.1addpkgsrc/biology/canu/DESCR
1.1addpkgsrc/biology/canu/Makefile
1.1addpkgsrc/biology/canu/PLIST
1.1addpkgsrc/biology/canu/patches/patch-Makefile
1.1addpkgsrc/biology/canu/patches/patch-pipelines_canu_Defaults.pm
1.1addpkgsrc/biology/canu/patches/patch-pipelines_canu_Execution.pm
1.1addpkgsrc/biology/canu/patches/patch-utility_objectStore.C