./parallel/sge, Son of Grid Engine distributed resource management system

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Branch: CURRENT, Version: 8.1.6nb4, Package name: sge-8.1.6nb4, Maintainer: pkgsrc-users

The Grid Engine project is an open source community effort
to facilitate the adoption of distributed computing solutions.
The Grid Engine project provides enabling distributed resource
management software for wide ranging requirements from compute
farms to grid computing.

Required to run:
[databases/db4] [lang/perl5] [lang/tcl] [x11/Xbae] [x11/libXpm]

Required to build:
[pkgtools/x11-links] [x11/renderproto] [x11/xproto] [x11/xbitmaps]

Master sites:

SHA1: 8348a543c736ed4f1c36cf1e8242eeb1a61033df
RMD160: 231f4d100722c7a99a92e0b9b989125e5d15f295
Filesize: 11596.903 KB

Version history: (Expand)

CVS history: (Expand)

   2016-03-05 12:29:49 by Jonathan Perkin | Files touched by this commit (1813) | Package updated
Log message:
Bump PKGREVISION for security/openssl ABI bump.
   2015-11-25 13:52:27 by Jonathan Perkin | Files touched by this commit (3)
Log message:
Remove mk/find-prefix.mk usage from the parallel category.

The find-prefix infrastructure was required in a pkgviews world where
packages installed from pkgsrc could have different installation
prefixes, and this was a way for a dependency prefix to be determined.

Now that pkgviews has been removed there is no longer any need for the
overhead of this infrastructure.  Instead we use BUILDLINK_PREFIX.pkg
for dependencies pulled in via buildlink, or LOCALBASE/PREFIX where the
dependency is coming from pkgsrc.

Provides a reasonable performance win due to the reduction of `pkg_info
-qp` calls, some of which were redundant anyway as they were duplicating
the same information provided by BUILDLINK_PREFIX.pkg.
   2015-11-03 00:46:13 by Alistair G. Crooks | Files touched by this commit (19)
Log message:
Add SHA512 digests for distfiles for parallel category

Existing SHA1 digests verified, all found to be the same on the
machine holding the existing distfiles (morden).  Existing SHA1
digests retained for now as an audit trail.
   2015-06-29 23:44:34 by Mark Davies | Files touched by this commit (2)
Log message:
Deal with linux 4.x
   2015-06-12 12:52:19 by Thomas Klausner | Files touched by this commit (3152)
Log message:
Recursive PKGREVISION bump for all packages mentioning 'perl',
having a PKGNAME of p5-*, or depending such a package,
for perl-5.22.0.
   2014-05-30 01:38:20 by Thomas Klausner | Files touched by this commit (3049)
Log message:
Bump for perl-5.20.0.
Do it for all packages that
* mention perl, or
* have a directory name starting with p5-*, or
* depend on a package starting with p5-
like last time, for 5.18, where this didn't lead to complaints.
Let me know if you have any this time.
   2014-02-13 00:18:57 by Matthias Scheler | Files touched by this commit (1568)
Log message:
Recursive PKGREVISION bump for OpenSSL API version bump.
   2014-01-14 11:21:39 by Mark Davies | Files touched by this commit (11) | Package updated
Log message:
Update to sge 8.1.6

Version 8.1.6

* Bug fixes

Version 8.1.5

* Bug fixes

Version 8.1.4

Milestone version: over 1000 patches since the last from Sun

* Bug fixes

* Enhancements

  * qacct:  print category information; support -A like -P ; make
    -u a synonym for -o; -E selects on job end times read from
    standard input with -f
  * Move manager/operator setup in startup scripts
  * Installation creates an environment modules file
  * Add monitor_qmaster.sh script
  * Write shepherd panic messages to syslog, not into /tmp
  * Add .desktop file for qmon
  * rpm/dpkg packaging allows building against motif (recent Debian/Fedora)
  * Accounting reports qmaster-enforced resource limits (only on master PE
    task if accounting_summary is false)
  * Add "smp" to the default queue PE list
  * install_execd doesn't check the presence of (mostly irrelevant) binaries
  * Add configuration for logcheck

* Potentially incompatible changes

  * renew_all_certs.ksh re-named to renew_all_certs.sh
  * Expand $ja_task_id to 0 for non-array jobs
  * Move manager/operator setup in startup scripts
  * For security reasons, installation defaults for min_uid, min_gid in
    sge_conf(5) are now 100 without CSP.  See
  * RPM layout changed to put relevant ones under noarch (on RHEL6 and
    recent Fedora), with a separate guiinst package
  * Memory values can be input and output in TB or tB (possible
    incompatibility parsing output)
  * Reduce execd CPU time reading large smaps files from Linux /proc and
    provide USE_SMAPS in execd_params to turn it on (default now off
    because huge smaps are generated by some programs)
  * Remove redundant -verify option from qsh, qlogin (per doc)

Version 8.1.3

* Bug fixes

* Enhancements

  * Document Interix building explicitly
  * qstat reports array task maximum concurrency
  * qstatus removes [] suffix for non-array jobs if -t was requested
  * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts
  * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE,
  * Debian packaging (as an add-on, installing into /opt/sge)
  * Expand $sge_root and $sge_cell in the definitions of prolog and
    similar methods
  * Check in init script that shepherd will load
  * Add lx-armhf architecture
  * On Linux and NetBSD, report jobs' virtual memory usage as accurately
    as possible
  * Add -nobincheck installation option to avoid checking binaries
  * Add some build hooks, useful for Debian particularly.

* Potentially incompatible changes

  * qacct prints units (might affect parsing the output)
  * Correct spelling of "comunication_error" in qstat XML error output
  * Fix problems submitting to ARs (printing times now doesn't use
    a days field in qstat etc.)
  * Java version >= 1.5 required
  * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux

* Other changes

  * Don't install the ckpt directory (contents obsolete)

Version 8.1.2

* Bug fixes

* Enhancements

  * Use cpusets for process containment on fairly recent Linux-based systems
    (see USE_CGROUPS in sge_conf(5))
  * Add bootstrap build script
  * Make SGE template an RPM conf file

* Incompatible changes

  * Make CRL and certificate expiry consistent

Version 8.1.1

* Bug fixes

* Security

  * Don't pass any user environment to remote startup daemons -- better
    fix for half of CVE-2012-0208

* Enhancements

  * SGE_BINDING is set in the environment for all types of binding
  * New jobstats(1) provides historical job summary
  * Berkeleydb spools can optionally be opened "private" to allow
    operation on NFS3 filesystems.  Currently no installer support, but
    see bootstrap(5) and the health warning
  * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA
    jobs to enter the error state; see drmaa_submit(3)
  * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1)
  * The user from which mail is sent can be configured in sge_conf(5)
  * Topology items are now static load values; see load_parameters(5)
  * qstat now prints array job dependency info
  * Default to support for qsort_args in sge_pe(5)
  * Include an example of logrotate usage
  * Install an "smp" PE
  * Distribute/document sge_share_mon(1) to print share tree
  * Improve install template defaults
  * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c)
  * Allow building Kerberos/GSSAPI security modules against Heimdal
    (but GSS is still not properly usable)
  * Support arm and mipsel on GNU/Linux, completing the set
    of official Debian Linux-based ports
  * Support for OpenBSD (untested)
  * Preliminary support for Cygwin: everything builds, clients work
    (lightly tested), daemons need fixing
  * Add ja_task_id to expandable variables in ckpt_command and similar
  * distinst supports installation with install(1) for use with -local

* Incompatible changes

  * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA
    but installation will offer to move it [fixme]
  * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6
  * The spool format for parallel job tasks has changed from any previous
    version built with qsort_args (as above), which will make live
    upgrades from such a version fail on nodes running parallel jobs

* Other changes

  * Extensive internal changes to improve robustness, e.g. of
    string-handling against buffer overruns -- somewhat error-prone
    and may have caused regressions; more required
  * Install script allows rsh et al to be omitted from binary distribution
    in favour of ssh

Version 8.1.0

* Security fix

  * Prevent users other than root deleting entries with sgepasswd

* Version numbering

  * Switch to a more logical numbering scheme now that the Univa
    baseline is irrelevant

* Bug fixes

* Other changes

  * Hadoop support now for a more recent Hadoop distribution (see

Version 8.0.0e

Mostly build and security issues

* Bug fixes

* Security fixes

  The first fix is for a trivial remote root by a valid user.  The
  others, including fixes for potential buffer overruns in daemon and
  setuid programs, may or may not be exploitable.

  * Sanitize the environment before executing remote startup programs etc.
    Somewhat incompatible:  LD_LIBRARY_PATH etc. may need to be set
    differently.  See the security notes in remote_startup(5) and
    sge_conf(5).  (CVE-2012-0208, thanks to William Hay)
  * Don't write initial log messages in /tmp.  Somewhat
    incompatible:  initial messages now in syslog.
  * Avoid using mktemp.  (Probably not a significant problem.)
  * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP.
    (Not normally a security issue.)
  * Bounds checking in replace_params
  * Avoid execd crash and possible overruns
  * Fixes for buffer overrun and other improvements for (setuid
    program) sgepasswd