./biology/stacks, Software pipeline for building loci from short-read sequences

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Branch: pkgsrc-2018Q4, Version: 2.2, Package name: stacks-2.2, Maintainer: bacon

Stacks is a software pipeline for building loci from short-read sequences, such
as those generated on the Illumina platform. Stacks was developed to work with
restriction enzyme-based data, such as RAD-seq, for the purpose of building
genetic maps and conducting population genomics and phylogeography.


Required to run:
[lang/gcc49-libs] [lang/python27] [lang/perl5]

Required to build:
[lang/gcc49] [pkgtools/cwrappers]

Master sites:

SHA1: ee99798378b906f356c23da0073d0361440263bf
RMD160: 2f5097c668d9662dbbec705fe3bf00216c11d388
Filesize: 10569.31 KB

Version history: (Expand)