./biology/canu, Single molecule sequence assembler for genomes large and small

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Branch: pkgsrc-2022Q1, Version: 1.8nb12, Package name: canu-1.8nb12, Maintainer: bacon

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule
sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

Detect overlaps in high-noise sequences using MHAP

Generate corrected sequence consensus

Trim corrected sequences

Assemble trimmed corrected sequences

Master sites:

Filesize: 2407.533 KB

Version history: (Expand)