2014-09-24 12:40:57 by Jonathan Perkin | Files touched by this commit (2) |
Log message:
Avoid reference to WRAPPER_BINDIR in final binaries.
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2014-02-14 10:09:40 by Adam Ciarcinski | Files touched by this commit (2) |
Log message:
Changes 1.18.12:
Configuration
-------------
- Added a configuration option to change the default plugin path.
The configure option is --with-default-plugindir=location.
The cmake option is -DH5_DEFAULT_PLUGINDIR:PATH=location.
HDFFV-8513. (ADB 2013/09/04)
- Renamed FFLAGS to FCFLAGS in configure. (ADB 2013/08/13)
- CMake can now package a compressed examples file, the default for
Windows binaries from HDF Group. (ADB - 2013/07/22)
Tools
-----
- h5repack: Added the ability to use plugin filters to read and write
files. The option uses the filter number. HDFFV-8345
(ADB - 2013/09/04).
- h5dump: Added the option -N --any_path, which searches the file for
paths that match the search path. HDFFV-7989 (ADB - 2013/08/12).
- h5dump: Added the optional arg 0 to -A, which excludes attributes
from display. HDFFV-8134 (ADB - 2013/08/01).
C++ API
-------
- Added tutorial examples to C++/examples. They can be installed by
"make install-examples" and, in the installed directory, they can be
executed by running the script file run-c++-ex.sh. (BMR - 2013/09/28)
- A new class, H5::H5Location, is added to represent the location concept
in the C library. It is a base class to H5::H5File and H5::H5Ojbect,
whose member functions are moved into H5::H5Location. H5::H5File can
now inherent those functions. As a result, an H5::H5File object can have
an attribute. (BMR - 2013/09/27)
- Added wrappers for H5Rget_obj_type2 to retrieve the type of the object
that an object reference points to. (BMR - 2013/09/27)
H5O_type_t H5Location::getRefObjType(void *ref, H5R_type_t ref_type)
- Added wrappers for H5Aexist to check whether an attribute exists given
a name. (BMR - 2013/09/27)
bool H5::H5Location::attrExists(const char* name)
bool H5::H5Location::attrExists(const H5std_string& name)
- Added a number of overloaded functions for convenience. (BMR - 2013/09/27)
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2013-09-01 14:14:07 by OBATA Akio | Files touched by this commit (33) |
Log message:
recursive bump from hdf5 shlib major bump.
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2013-09-01 11:56:41 by Adam Ciarcinski | Files touched by this commit (6) |
Log message:
Changes 1.8.11:
Configuration
- Libtool version number is changed to 8.0.0 because there are API
changes. See below for details.
- Mac OS X 10.7 (Lion) and 10.8 (Mountain Lion) uses clang/clang++ as the
default C and C++ compilers.
- CMake minimum is now 2.8.10.
- A new tool, cmakehdf5, which is a build command script similar to
buildhdf5 is added and is available in the bin directory.
Library
- The library can load filter libraries dynamically during runtime. Users
can set the search path through environment variable HDF5_PLUGIN_PATH
and call H5Pset_filter to enable a dynamic filter.
- Added new API functions H5Dscatter and H5Dgather to scatter data to and
and gather data from a selection within a memory buffer.
- The library now supports the data conversion from enumeration to numeric
(integer and floating-point number) datatypes. See Issue HDFFV-8221.
Tools
- h5dump: added new option -O or -ddl to output the ddl text to a file. This
is a complement to the -o or --output option, which redirects the data to
a file.
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2013-04-09 16:25:41 by Adam Ciarcinski | Files touched by this commit (2) |
Log message:
Changes 1.8.10-patch1:
Library
-------
- The library now behaves correctly when performing large I/O operations on
Mac OS-X. Previously, single I/O operations > 2 GB would fail since the
Darwin read/write calls cannot handle the number of bytes that their
parameter types imply.
Fixes HDFFV-7975 and HDFFV-8240 (DER - 07 JAN 2013)
- Fixed a bug in the core VFD that cause failures when opening files > 2 GB.
Fixes HDFFV-8124 and HDFFV-8158 (DER - 07 JAN 2013)
Tools
-----
- The following h5stat test case failed in BG/P machines (and potentially
other machines that display extra output if an MPI task returns with a
non-zero code.)
Testing h5stat notexist.h5
The test script was fixed to ignore the extra output.
HDFFV-8233 (AKC - 2012/12/17)
- h5diff: Fixed slowness when comparing HDF5 files with many attributes.
Much slower performance was identified with later release version
(from 1.8.7 to 1.8.10) compared to 1.8.6. The issue was introduced
from fixing an attribute related bug for 1.8.7 release in the past.
HDFFV-8145 (JKM 2012/12/13)
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2012-12-09 01:07:39 by Adam Ciarcinski | Files touched by this commit (16) |  |
Log message:
Changes 1.8.10:
* The following new C function has been added:
H5Pget_mpio_no_collective_cause
* The following new Fortran subroutine has been added:
h5pget_mpio_actual_io_mode_f
* The syntax of the following high-level C function has changed:
H5TBAget_fill
This functionâs return type has been changed to h5tri_t. A return value of \
1 indicates that a fill value is present, 0 indicates that no fill value is \
present, and a negative value indicates an error. (The former return type was \
herr_t.)
Note that H5TBAget_fill and a companion function H5TBAget_title, both in the \
HDF5 Table (H5TB) high-level API, are undocumented. These functions will be \
added to the HDF5 Reference Manual shortly after HDF5 Release 1.8.10.
Changed Command-line Tool
* h5import has been updated to accept an input file created by h5dump.
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2012-10-31 12:19:55 by Aleksej Saushev | Files touched by this commit (1460) |
Log message:
Drop superfluous PKG_DESTDIR_SUPPORT, "user-destdir" is default these days.
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2012-10-27 10:54:48 by Aleksej Saushev | Files touched by this commit (12) |
Log message:
Update to HDF5 1.8.9
This doesn't pass self-tests, but it isn't regression,
previous package didn't pass them as well.
(While here, make both packages share the same distinfo.)
Changes in HDF5 1.8.9
HDF5 1.8.9 is a minor release, but contains several important
new features and bug fixes. Changes in this release include the
following:
* Committed datatypes can now be merged when copying objects,
using the new flag H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG.
Several new API routines have been included in support of
this feature.
* A file in memory can now be accessed in the same way as a
file on disk. New APIs were added to support this feature.
* Many changes to the tools have been made, including the following:
+ The h5repack performance has been improved dramatically
for large chunked datasets.
+ The -S (or --summary) option was added to h5stat to
display a summary of the file space usage for a file.
+ A wildcard can now be used with h5dump to specify multiple files.
* H5LTpath_valid was added to determine if a path is correct
and a link resolves to a valid object.
* The Fortran counterpart to H5Ocopy, h5ocopy_f, was added.
This release contains many other changes and bug fixes not listed here.
Please be sure to read the Release Notes for a comprehensive
list of new features and bug fixes.
Changes in HDF5 1.8.8
HDF5 1.8.8 is a minor release, but contains a few important new
features and bug fixes. Changes in this release include the
following:
* Changes to the Fortran interface:
+ Fortran wrappers for the Dimension Scales APIs were added.
For the new subroutine signatures, see:
http://www.hdfgroup.org/HDF5/doc/HL/RM_H5DS.html
+ The Fortran interface now uses the Fortran 2003 standard,
enabling a wider set of Fortran and HDF5 datatypes to be
supported, including:
o Any kind of INTEGER or REAL
o Fortran derived types
o Fortran and HDF5 enumeration
o HDF5 variable-length datatypes
o HDF5 compound datatypes of any complexity
It also contains new subroutines corresponding to those
C APIs which have callback functions as parameters.
For a general overview and information on how to enable
these new Fortran features, please see the following paper:
http://www.hdfgroup.org/HDF5/doc/fortran/NewFeatures_F2003.pdf
HDF5 examples that use Fortran 2003 (with the suffix "F03") \
can be found here:
\
http://www.hdfgroup.org/ftp/HDF5/examples/examples-by-api/api18-fortran.html
The --enable-fortran2003 configure flag was added to
enable Fortran 2003 support in the HDF5 Fortran library.
This flag should be used along with the --enable-fortran
flag and takes affect only when a Fortran compiler is
Fortran 2003 compliant.
* H5Tcreate now supports a string type (fixed-length and variable-length).
* New APIs, H5Pget_mpio_actual_chunk_opt_mode and H5Pget_mpio_actual_io_mode,
were added for querying whether/how a collective I/O operation completed.
* Numerous changes were made to the tools (h5diff, h5repack, h5jam, h5dump).
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2012-02-16 19:45:59 by Hans Rosenfeld | Files touched by this commit (1) |
Log message:
Fix build on SunOS.
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2011-10-07 12:38:52 by Alexander Nasonov | Files touched by this commit (26) |  |
Log message:
Update devel/hdf5 from 1.6.10nb1 to 1.8.7.
A list of changes is available at
http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
A list of new features of 1.8.x release is available at
http://www.hdfgroup.uiuc.edu/HDF5/doc_1.8pre/WhatsNew180.html
This update removes "cxx" option from the package. New devel/hdf5-c++
should be used instead.
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