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(this page)| 2024-01-24 18:35:53 by Dr. Thomas Orgis | Files touched by this commit (1) |
Log message: biology/libpll: only works on Linux |
| 2024-01-24 17:37:10 by Thomas Klausner | Files touched by this commit (1) |
Log message: libpll: fix pkglint |
| 2024-01-24 17:36:57 by Thomas Klausner | Files touched by this commit (2) |
Log message: libppl: fix unportable test operator |
| 2024-01-24 17:36:38 by Thomas Klausner | Files touched by this commit (1) |
Log message: libppl: fix buildlink3 file |
| 2024-01-17 16:53:51 by Dr. Thomas Orgis | Files touched by this commit (2) |
Log message: libpll: Do not convert man page to PDF This depends on locating ps2pdf and doesn't seem that useful. If you want the man page, any man page, as PDF, you can run man -t | ps2pdf yourself. |
| 2023-12-18 02:41:49 by Dr. Thomas Orgis | Files touched by this commit (1) |
Log message: biology/libpll: add bl3 |
| 2023-12-18 02:39:13 by Dr. Thomas Orgis | Files touched by this commit (6) |
Log message:
biology/libpll: added package for PLL phylogenetic analysis
The aim of this project is to implement a versatile high-performance
software library for phylogenetic analysis. The library should serve
as a lower-level interface of PLL (Flouri et al. 2015) and should
have the following properties:
open source code with an appropriate open source license.
64-bit multi-threaded design that handles very large datasets.
easy to use and well-documented.
SIMD implementations of time-consuming parts.
as fast or faster likelihood computations than RAxML (Stamatakis 2014).
fast implementation of the site repeats algorithm (Kobert 2017).
functions for tree visualization.
bindings for Python.
generic and clean design.
Linux, Mac, and Microsoft Windows compatibility.
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