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CVS Commit History:


   2024-10-26 13:55:30 by Makoto Fujiwara | Files touched by this commit (2) | Package updated
Log message:
(math/R-RcppEigen) Updated 0.3.3.9.4 to 0.3.4.0.2,  make test passed

( R CMD Rd2txt  work/RcppEigen/inst/NEWS.Rd |head -60 )
Changes in RcppEigen version 0.3.4.0.2 (2024-08-23):

        * Correct two typos in the ORCID tag

Changes in RcppEigen version 0.3.4.0.1 (2024-08-14):

        * Conditionally comment-out 'xerbla' in 'blas.h' as it is now
          providedd by R-devel albeit with 'FC_LEN_T' (per a CRAN
          request)

        * Minor package updates (continuous integration, badges)

Changes in RcppEigen version 0.3.4.0.0 (2024-02-28):

        * The Eigen version has been upgrade to release 3.4.0 (Yixuan)

        * Extensive reverse-dependency checks ensure only three out of
          over 400 packages at CRAN are affected; PRs and patches
          helped other packages

        * The long-running branch also contains substantial
          contributions from Mikael Jagan (for the lme4 interface) and
          Andrew Johnson (revdep PRs)
   2024-01-24 12:37:11 by Makoto Fujiwara | Files touched by this commit (2)
Log message:
(math/R-RcppEigen) 0.3.3.9.3 to 0.3.3.9.4

2023-11-01  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.4
	* inst/NEWS.Rd: Release 0.3.3.9.4

2023-10-05  Mikael Jagan  <jaganmn@mcmaster.ca>

	* DESCRIPTION: Package 'Matrix' is now only a Suggests:
	* NAMESPACE: Remove unconditional imports from package Matrix

	* inst/include/Eigen/CholmodSupport: No longer need to include
	RcppEigenCholmod.h
	* inst/include/Eigen/src/CholmodSupport/CholmodSupport.h: Small
	wrapper adjustments conditional on Matrix use
	* inst/include/RcppEigenCholmod.h: Updated
	* inst/include/RcppEigenForward.h: Simplified
	* inst/include/RcppEigenWrap.h: Ditto
	* inst/include/RcppEigenStubs.cpp: New shorter helper
	* inst/include/RcppEigenStubs.h: Removed

2023-07-21  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Date, Version): Roll micro version and date

	* README.md: Add r-universe badge

2023-07-20  Dirk Eddelbuettel  <edd@debian.org>

	* src/RcppEigen.cpp (EigenNbThreads): Add simple threads reporter

	* R/fastLm.R (fastLmPure): Simpler call to `fastLm_Impl()`

	* src/init.c: Replaced by auto-generated section in RcppExports.cpp
	* src/RcppExports.cpp: Regenerated
	* R/RcppExports.R: Idem

	* src/Makevars: Document possible use of '-fopenmp'
	* src/Makevars.win: Idem

2023-04-18  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Use app.codecov.io as base for codecov link

2023-03-10  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Date, Version): Roll minor version

	* R/RcppEigen.package.skeleton.R: No longer set Imports: RcppEigen in
	DESCRIPTION and NAMESPACE

2023-02-12  Dirk Eddelbuettel  <edd@debian.org>

	* inst/CITATION: Convert to bibentry() style with person()
   2023-06-15 13:38:41 by Makoto Fujiwara | Files touched by this commit (1)
Log message:
(math/R-RcppEigen) Update API_DEPENDS version
   2022-12-18 10:23:47 by Makoto Fujiwara | Files touched by this commit (2)
Log message:
(math/R-RcppEigen) Updated  0.3.3.9.1 to 0.3.3.9.3

2022-11-04  Dirk Eddelbuettel  <edd@debian.org>

	* src/init.c: Add 'void' for proper prototype pleasing clang-15

	* R/fastLm.R (summary.fastLm,print.fastLm): Refer to correct and full
	variable name df.residual in the returned object

	* .github/workflows/ci.yaml (jobs): Update to actions/checkout@v3

2022-09-15  Jonah Gabry  <jgabry@gmail.com>

	* inst/skeleton/rcppeigen_hello_world.cpp: Correct typo

2022-04-08  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Depends): Add a versioned dependency on R 3.6.0 or
	later because of our use of FCONE to support USE_FC_LEN_T

2022-04-05  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.2
	* inst/NEWS.Rd: Release 0.3.3.9.2

2022-04-04  Dirk Eddelbuettel  <edd@debian.org>

	* src/fastLm.cpp: Add FCONE in two calls for improved Fortran and C
	character interface per Writing R Extensions, Section 6.6.1

2022-01-16  Dirk Eddelbuettel  <edd@debian.org>

	* inst/tinytest/test_wrap.R: Added (optional) large memory wrap tests
 	* inst/tinytest/cpp/wrap.cpp: Added C++ part of test

	* .codecov.yml: Added to not trigger PR fail for small additions

2022-01-16  Mikael Jagan  <jaganmn@mcmaster.ca>

	* inst/include/RcppEigenWrap.h: Refine use plain dense wrap() change

2022-01-15  Mikael Jagan  <jaganmn@mcmaster.ca>

	* inst/include/RcppEigenWrap.h: Use R_xlen_t for vectors rows + cols

2021-12-29  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Add total downloads badge

2021-12-08  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Remove unused continuous integration artifact and badge

2021-10-13  Dirk Eddelbuettel  <edd@debian.org>

	* inst/CITATION: Refinment of doi use

2021-10-10  Dirk Eddelbuettel  <edd@debian.org>

	* inst/CITATION: Switch JSS url to doi form per JSS request
	* README.md: Idem

2021-07-19  Dirk Eddelbuettel  <edd@debian.org>

	* inst/include/RcppEigenWrap.h: Two more #nocov tags
	* src/fastLm.cpp: One more #nocov tag

2021-07-18  Dirk Eddelbuettel  <edd@debian.org>

	* inst/tinytest/test_fastLm.R: Add tests for summary
	* src/fastLm.cpp: Add a few #nocov tags

2021-07-17  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Date, Version): Roll minor version

	* R/RcppEigen.package.skeleton.R (RcppEigen.package.skeleton): Also
	import RcppEigen in DESCRIPTION

2021-06-07  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Date, Version): Roll minor version

	* inst/tinytest/test_misc.R: New test file
	* inst/tinytest/test_fastLm.R: Added tests

	* R/fastLm.R: Add single one-line nocov tag

	* .Rbuildignore: Add .covignore and .codecov.yml

2021-06-06  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Added coverage badge

	* .github/workflows/ci.yaml (jobs): Turn on coverage
	* .covrignore: Added
	* .codecov.yml (ignore): Idem

	* R/RcppEigen.package.skeleton.R: Set nocov

2021-05-09  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (URL): Add GitHub repo to URL field

2021-01-02  Dirk Eddelbuettel  <edd@debian.org>

	* R/RcppEigen.package.skeleton.R: Wrap any() around grepl()

2020-12-25  Dirk Eddelbuettel  <edd@debian.org>

	* .github/workflows/ci.yaml: Small tweaks to CI YAML file
   2021-10-26 12:56:13 by Nia Alarie | Files touched by this commit (458)
Log message:
math: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 16:28:36 by Nia Alarie | Files touched by this commit (458)
Log message:
math: Remove SHA1 hashes for distfiles
   2021-01-03 11:04:58 by Makoto Fujiwara | Files touched by this commit (2) | Package updated
Log message:
(math/R-RcppEigen) Updated 3.3.5.0 to 3.3.9.1 (make test fails for now)

2020-12-17  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Version, Date): CRAN Release 0.3.3.9.1 (following
	coordinated update of reverse dependency StanHeaders)
	* inst/NEWS.Rd: Release 0.3.3.9.1

2020-12-14  Dirk Eddelbuettel  <edd@debian.org>

	* .github/workflows/ci.yaml: Add CI runner using r-ci
	* README.md: Add new badge

2020-12-05  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Version, Date): Release 0.3.3.9.0

	* inst/include/Eigen: Upgraded to Eigen 3.3.9
	* inst/include/unsupported/Eigen: Idem
	* patches/eigen-3.3.9.diff: Carried local CRAN patches forward

	* .travis.yml: Switch to r-ci using focal and bspm

	* README.md: Updated URLs to https and/or redirect location
	* inst/CITATION: Idem
	* man/RcppEigen-package.Rd: Idem
	* man/fastLm.Rd: Idem

2020-08-16  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Add JSS badge

2020-03-29  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Added commit badge, edited

2020-01-22  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: README.md: Add a Debian badge

2019-11-16  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Version, Date): Release 0.3.3.7.0

	* inst/include/Eigen: Upgraded to Eigen 3.3.7
	* inst/include/unsupported/Eigen: Idem
	* patches/eigen-3.3.7.diff: Carried local CRAN patches forward

2019-11-01  Dirk Eddelbuettel  <edd@debian.org>

	* R/unit.test.R (compile_unit_tests): Removed as no longer needed

2019-10-31  Dirk Eddelbuettel  <edd@debian.org>

	* inst/tinytest/test_transform.R: Switch from RUnit to tinytest
	* inst/tinytest/test_wrap.R: Idem

	* inst/tinytest/cpp/transform.cpp: Added using Rcpp Attributes
	* inst/tinytest/cpp/wrap.cpp: Idem

	* inst/tinytest/cpp/sparse.cpp: More idiomatic Eigen code
	* inst/tinytest/test_sparse.R: Idem

	* .editorconfig: Added

2019-10-30  Dirk Eddelbuettel  <edd@debian.org>

	* DESCRIPTION (Suggests): Switch from RUnit to tinytest
	* .travis.yml (install): Ditto

	* tests/tinytest.R: Converted to tinytest

        * test_sparse.R: Converted to tinytest
	* cpp/sparse.cpp: Added using Rcpp Attributes

2019-10-29  Dirk Eddelbuettel  <edd@debian.org>

        * test_fastLm.R: Converted to tinytest
        * test_RcppEigen.R: Idem
        * test_solution.R: Idem

	* cpp/rcppeigen.cpp: Added using Rcpp Attributes
        * cpp/solution.cpp: Idem

2019-10-28  Dirk Eddelbuettel  <edd@debian.org>

	* tests/tinytest.R: Renamed from tests/doRUnit.R
	* inst/tinytest/test_fastLm.R: Renamed from inst/unitTests/runit*
	* inst/tinytest/test_RcppEigen.R: Idem
	* inst/tinytest/test_solution.R: Idem
	* inst/tinytest/test_sparse.R: Idem
	* inst/tinytest/test_transform.R: Idem
	* inst/tinytest/test_wrap.R: Idem

2019-10-13  Dirk Eddelbuettel  <edd@debian.org>

	* README.md: Added CRAN + BioConductor badges for reverse depends,
	add StackOverflow badge to recommend help searches under 'Rcpp'

	* DESCRIPTION (Version, Date): Roll minor version

	* R/RcppEigen.package.skeleton.R (RcppEigen.package.skeleton): Test for
	example_code outside of haveKitten test; remove force argument if unused

2019-05-24  Dirk Eddelbuettel  <edd@debian.org>

	* vignettes/RcppEigen-Introduction.Rnw: Update vignette to use
	RcppEigen:::eigen_version() instead of .Call()

2019-03-29  Dirk Eddelbuettel  <edd@debian.org>

	* inst/skeleton/rcppeigen_hello_world.cpp: Rework first example to
	not rely on Eigen RNG which R CMD check would complain about.

2019-02-16  James Joseph Balamuta <balamut2@illinois.edu>

	* R/runit.RcppEigen.R: Removed listing RcppEigen in Imports during
	skeleton package creation.
   2019-08-08 21:53:58 by Brook Milligan | Files touched by this commit (189) | Package updated
Log message:
Update all R packages to canonical form.

The canonical form [1] of an R package Makefile includes the
following:

- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
  needed), and CATEGORIES.

- HOMEPAGE is not present but defined in math/R/Makefile.extension to
  refer to the CRAN web page describing the package.  Other relevant
  web pages are often linked from there via the URL field.

This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.

[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html
   2018-07-28 16:40:53 by Brook Milligan | Files touched by this commit (126)
Log message:
Remove MASTER_SITES= from individual R package Makefiles.

Each R package should include ../../math/R/Makefile.extension, which also
defines MASTER_SITES.  Consequently, it is redundant for the individual
packages to do the same.  Package-specific definitions also prevent
redefining MASTER_SITES in a single common place.
   2018-03-09 21:27:07 by Min Sik Kim | Files touched by this commit (2)
Log message:
math/R-RcppEigen: Update to 0.3.3.4.0

Changes:
- Updated to version 3.3.4 of Eigen
- Condition long long use on C++11.
- Pragmas for g++ & clang to suppress diagnostics messages are
  disabled per CRAN Policy; use -Wno-ignored-attributes to quieten.

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