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Subject: CVS commit: pkgsrc/math/R
From: Wen Heping
Date: 2018-07-04 09:27:13
Message id: 20180704072713.A5624FB3E@cvs.NetBSD.org
Log Message:
Update to 3.5.1
Upstream changes:
CHANGES IN R 3.5.1
BUG FIXES
file("stdin") is no longer considered seekable.
dput() and dump() are no longer truncating when options(deparse.max.lines = \
*) is set.
Calls with an S3 class are no longer evaluated when printed, fixing part of \
PR#17398, thanks to a patch from Lionel Henry.
Allow file argument of Rscript to include space even when it is first on the \
command line.
callNextMethod() uses the generic from the environment of the calling \
method. Reported by Hervé Pagès with well documented examples.
Compressed file connections are marked as blocking.
optim(*, lower = c(-Inf, -Inf)) no longer warns (and switches the method), \
thanks to a suggestion by John Nash.
predict(fm, newdata) is now correct also for models where the formula has \
terms such as splines::ns(..) or stats::poly(..), fixing PR#17414, based on a \
patch from Duncan Murdoch.
simulate.lm(glm(*, gaussian(link = <non-default>))) has been \
corrected, fixing PR#17415 thanks to Alex Courtiol.
unlist(x) no longer fails in some cases of nested empty lists. Reported by \
Steven Nydick.
qr.coef(qr(<all 0, w/ colnames>)) now works. Reported by Kun Ren.
The radix sort is robust to vectors with >1 billion elements (but long \
vectors are still unsupported). Thanks to Matt Dowle for the fix.
Terminal connections (e.g., stdin) are no longer buffered. Fixes PR#17432.
deparse(x), dput(x) and dump() now respect c()'s argument names recursive \
and use.names, e.g., for x <- setNames(0, "recursive"), thanks to \
Suharto Anggono's PR#17427.
Unbuffered connections now work with encoding conversion. Reported by \
Stephen Berman.
‘.Renviron’ on Windows with Rgui is again by default searched for in \
user documents directory when invoked via the launcher icon. Reported by Jeroen \
Ooms.
printCoefmat() now also works with explicit right=TRUE.
print.noquote() now also works with explicit quote=FALSE.
The default method for pairs(.., horInd=*, verInd=*) now gets the correct \
order, thanks to reports by Chris Andrews and Gerrit Eichner. Additionally, when \
horInd or verInd contain only a subset of variables, all the axes are labeled \
correctly now.
agrep("..|..", .., fixed=FALSE) now matches when it should, thanks \
to a reminder by Andreas Kolter.
str(ch) now works for more invalid multibyte strings.
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