Subject: CVS commit: pkgsrc/biology/stringtie
From: Jason Bacon
Date: 2023-08-12 16:58:35
Message id: 20230812145835.617B5FBDB@cvs.NetBSD.org

Log Message:
biology/stringtie: RNA-Seq assembly and quantification

StringTie is a fast and highly efficient assembler of RNA-seq alignments
into potential transcripts. The input can be the alignments of raw reads
as usual; it also accepts longer assembled sequences. The output can be
processed by downstream software including Ballgown, Cuffdiff, etc.

Files:
RevisionActionfile
1.1addpkgsrc/biology/stringtie/DESCR
1.1addpkgsrc/biology/stringtie/Makefile
1.1addpkgsrc/biology/stringtie/PLIST
1.1addpkgsrc/biology/stringtie/distinfo
1.1addpkgsrc/biology/stringtie/patches/patch-Makefile
1.1addpkgsrc/biology/stringtie/patches/patch-samtools-0.1.18_Makefile