Subject: CVS commit: pkgsrc/biology/fasda
From: Jason Bacon
Date: 2023-08-12 17:02:00
Message id: 20230812150200.48AF0FBDB@cvs.NetBSD.org

Log Message:
biology/fasda: Update to 0.1.4

Add --debug
Replace --map-gene with --feature-type for more flexibility
Use extended REs for gff3 feature selection
(default = RNA$|transcript$|gene_segment$, same as transcript in GTF)
Add --output-dir
Support |-separated ID aliases (report last alias)
Support outsourcing abundance calculation (default = stringtie)
Several bug fixes and minor enhancements

Changes: https://github.com/auerlab/fasda/releases

Files:
RevisionActionfile
1.5modifypkgsrc/biology/fasda/Makefile
1.4modifypkgsrc/biology/fasda/PLIST
1.4modifypkgsrc/biology/fasda/distinfo