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biology/mca-calling,
Core tools for Mosaic Chromosomal Alteration event calling
Branch: CURRENT,
Version: 0.1.0,
Package name: mca-calling-0.1.0,
Maintainer: baconThe mca-calling meta-package provides the core tools needed for
performing a typical mCA (Mosaic Chromosomal Alteration) analysis,
including conversion of SRA VCF files to a format suitable for
haplohseq and MoCha, and haplohseq and MoCha event calling. The
GWAS analysis that follows is typically done with R-based tools
installed within R.
Version history: (Expand)
- (2024-10-15) Package added to pkgsrc.se, version mca-calling-0.1.0 (created)
CVS history: (Expand)
2024-10-15 14:15:29 by Jason Bacon | Files touched by this commit (2) |
Log message:
biology/mca-calling: Core tools for mCA event calling
The mca-calling meta-package provides the core tools needed for
performing a typical mCA (Mosaic Chromosomal Alteration) analysis,
including conversion of SRA VCF files to a format suitable for
haplohseq and MoCha, and haplohseq and MoCha event calling. The
GWAS analysis that follows is typically done with R-based tools
installed within R.
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