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Subject: CVS commit: pkgsrc/misc/R-Hmisc
From: Makoto Fujiwara
Date: 2025-01-29 12:49:15
Message id: 20250129114915.32BAFFBE0@cvs.NetBSD.org
Log Message:
(misc/R-Hmisc) Updated 5.1.1 to 5.2.2
Changes in version 5.2-2 (2025-01-10)
* cutGn: new function to group a numeric variable into interals
guaranteeing a minimum group size; uses new Fortran subroutine
cutgn
* ordGroupBoot: new function to group a numeric variable minimally
so that bootstrap samples will cover all the original distinct
data values
* plsmo, xy.group.s: use cutGn instead of cut2
* num.intercepts: look at fit$info.matrix if fit$var is empty
Changes in version 5.2-1 (2024-11-30)
* re-wrote rcorr Fortran subroutine using vectorization and
improved numerical algorithm
* added function qrxcenter
* fixed llist so that label is not applied at the end if
labels=FALSE, and labels are not applied to NULLs
* added type to returned value for rcorr
Changes in version 5.2-0 (2024-10-19)
* added requireNamespace for safer in qcrypt
* require R 4.2.0 or later, to handle pipes
* new function pMedian for pseudomedian (Hodges-Lehmann one-sample
estimator)
* added pMedian to describe function
* Converted all Ratfor code to Fortran 2018
Changes in version 5.1-3 (2024-05-18)
* areg.boot: intercepted use of xlim when y is categorical; need to
improve logic on xout=
* redun: stored scores matrix in returned object, suitable for
r2describe
* r2describe: new function to list strongest predictors of each
variable in a matrix, from all the other columns
* movStats: added lrm_args argument
* logrank (in spower.s): removed non-working non-executed code for
stratified log rank, change hazard ratio estimate to Pike's
estimator. Previous hazard ratio calculation was incorrect.
* qcrypt: added service=NA to bypass keyring
* runParallel: changed progress directory explicitly to /tmp for Mac
* printL: new function
* redun: got around model.frame problem so that negated variables
are omitted from analysis; also fixed printing of missing values
Changes in version 5.1-2 (2024-03-09)
* dotchartpl: remove length(ugroup) criterion (unsure what this was
doing and made lower and upper be not plotted)
* dotchartpl: got around new bug in plotly when numeric vectors
were given to axis ticktext; changed to character via format()
* cut2: fixed to handle large g values (Thanks Cole Beck
https://github.com/harrelfe/Hmisc/pull/170)
* Added dependency on R 4.1.0 or later because of use of new pipe
operator in describe etc.
* GiniMd: got around bug in sum(empty vector) = 0 by returning NA
if na.rm=FALSE and there were any NAs
* testCharDateTime: correctly handle case where all values are NA
or '' and convert=TRUE
* hdquantile: allowed for scalar probs (see
https://github.com/harrelfe/Hmisc/pull/180; thanks Cole Beck)
* movStats: added nignore argument, defaults to 10 (the previous
behavior)
* history.data.frame, ecdf: fixed dev issue
https://github.com/harrelfe/Hmisc/issues/181
* spikecomp: for tresult='segments' removed attributes from vectors
to make data.table compliant
* xless: adapted for MacOS using open system command
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