Subject: CVS commit: pkgsrc/misc/R-Hmisc
From: Makoto Fujiwara
Date: 2025-01-29 12:49:15
Message id: 20250129114915.32BAFFBE0@cvs.NetBSD.org

Log Message:
(misc/R-Hmisc) Updated 5.1.1 to 5.2.2

Changes in version 5.2-2 (2025-01-10)

   * cutGn: new function to group a numeric variable into interals
     guaranteeing a minimum group size; uses new Fortran subroutine
     cutgn
   * ordGroupBoot: new function to group a numeric variable minimally
     so that bootstrap samples will cover all the original distinct
     data values
   * plsmo, xy.group.s: use cutGn instead of cut2
   * num.intercepts: look at fit$info.matrix if fit$var is empty

Changes in version 5.2-1 (2024-11-30)

   * re-wrote rcorr Fortran subroutine using vectorization and
     improved numerical algorithm
   * added function qrxcenter
   * fixed llist so that label is not applied at the end if
     labels=FALSE, and labels are not applied to NULLs
   * added type to returned value for rcorr

Changes in version 5.2-0 (2024-10-19)
   * added requireNamespace for safer in qcrypt
   * require R 4.2.0 or later, to handle pipes
   * new function pMedian for pseudomedian (Hodges-Lehmann one-sample
     estimator)
   * added pMedian to describe function
   * Converted all Ratfor code to Fortran 2018

Changes in version 5.1-3 (2024-05-18)

   * areg.boot: intercepted use of xlim when y is categorical; need to
     improve logic on xout=
   * redun: stored scores matrix in returned object, suitable for
     r2describe
   * r2describe: new function to list strongest predictors of each
     variable in a matrix, from all the other columns
   * movStats: added lrm_args argument
   * logrank (in spower.s): removed non-working non-executed code for
     stratified log rank, change hazard ratio estimate to Pike's
     estimator.  Previous hazard ratio calculation was incorrect.

   * qcrypt: added service=NA to bypass keyring
   * runParallel: changed progress directory explicitly to /tmp for Mac
   * printL: new function
   * redun: got around model.frame problem so that negated variables
     are omitted from analysis; also fixed printing of missing values

Changes in version 5.1-2 (2024-03-09)

   * dotchartpl: remove length(ugroup) criterion (unsure what this was
     doing and made lower and upper be not plotted)

   * dotchartpl: got around new bug in plotly when numeric vectors
     were given to axis ticktext; changed to character via format()

   * cut2: fixed to handle large g values (Thanks Cole Beck
     https://github.com/harrelfe/Hmisc/pull/170)

   * Added dependency on R 4.1.0 or later because of use of new pipe
     operator in describe etc.

   * GiniMd: got around bug in sum(empty vector) = 0 by returning NA
     if na.rm=FALSE and there were any NAs

   * testCharDateTime: correctly handle case where all values are NA
     or '' and convert=TRUE

   * hdquantile: allowed for scalar probs (see
     https://github.com/harrelfe/Hmisc/pull/180; thanks Cole Beck)

   * movStats: added nignore argument, defaults to 10 (the previous
     behavior)

   * history.data.frame, ecdf: fixed dev issue
     https://github.com/harrelfe/Hmisc/issues/181

   * spikecomp: for tresult='segments' removed attributes from vectors
     to make data.table compliant

   * xless: adapted for MacOS using open system command

Files:
RevisionActionfile
1.9modifypkgsrc/misc/R-Hmisc/Makefile
1.8modifypkgsrc/misc/R-Hmisc/distinfo