./wip/canu, Single molecule sequence assembler for genomes large and small

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Branch: CURRENT, Version: 2.2, Package name: canu-2.2, Maintainer: bacon

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule
sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

Detect overlaps in high-noise sequences using MHAP

Generate corrected sequence consensus

Trim corrected sequences

Assemble trimmed corrected sequences


Required to run:
[graphics/gnuplot] [lang/perl5] [devel/boost-libs]

Required to build:
[devel/boost-headers] [pkgtools/cwrappers]

Master sites:

Filesize: 2343.938 KB

Version history: (Expand)