Subject: CVS commit: pkgsrc/biology/vsearch
From: Jason Bacon
Date: 2019-05-10 18:19:22
Message id: 20190510161922.EA96FFB16@cvs.NetBSD.org

Log Message:
biology/vsearch: import vsearch-2.13.3

VSEARCH supports de novo and reference based chimera detection,
clustering, full-length and prefix dereplication, rereplication,
reverse complementation, masking, all-vs-all pairwise global
alignment, exact and global alignment searching, shuffling,
subsampling and sorting. It also supports FASTQ file analysis,
filtering, conversion and merging of paired-end reads.

The aim of this project is to create an alternative to the USEARCH
tool developed by Robert C. Edgar (2010).

Files:
RevisionActionfile
1.1addpkgsrc/biology/vsearch/DESCR
1.1addpkgsrc/biology/vsearch/Makefile
1.1addpkgsrc/biology/vsearch/PLIST
1.1addpkgsrc/biology/vsearch/distinfo
1.1addpkgsrc/biology/vsearch/patches/patch-configure.ac
1.1addpkgsrc/biology/vsearch/patches/patch-src_Makefile.am
1.1addpkgsrc/biology/vsearch/patches/patch-src_city.cc
1.1addpkgsrc/biology/vsearch/patches/patch-src_vsearch.h