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biology/canu,
Single molecule sequence assembler for genomes large and small
Branch: CURRENT,
Version: 1.8nb13,
Package name: canu-1.8nb13,
Maintainer: baconCanu is a fork of the Celera Assembler, designed for high-noise single-molecule
sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION).
Canu is a hierarchical assembly pipeline which runs in four steps:
Detect overlaps in high-noise sequences using MHAP
Generate corrected sequence consensus
Trim corrected sequences
Assemble trimmed corrected sequences
Required to run:[
graphics/gnuplot] [
lang/perl5] [
devel/boost-libs]
Required to build:[
devel/boost-headers] [
pkgtools/cwrappers]
Master sites:
Filesize: 2407.533 KB
Version history: (Expand)
- (2022-06-28) Updated to version: canu-1.8nb13
- (2022-01-10) Updated to version: canu-1.8nb12
- (2021-09-29) Updated to version: canu-1.8nb11
- (2021-05-25) Updated to version: canu-1.8nb10
- (2021-04-21) Updated to version: canu-1.8nb9
- (2021-01-01) Updated to version: canu-1.8nb8
CVS history: (Expand)