./biology/genesplicer, Computational Method for Splice Site Prediction

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Branch: CURRENT, Version: 20030403, Package name: genesplicer-20030403, Maintainer: pkgsrc-users

GeneSplicer is a fast, flexible system for detecting splice sites in the
genomic DNA of various eukaryotes. The system has been trained and tested
successfully on Plasmodium falciparum (malaria), Arabidopsis thaliana, human,
Drosophila, and rice.

Master sites:

Filesize: 9061.26 KB

Version history: (Expand)

CVS history: (Expand)


   2021-10-26 12:03:45 by Nia Alarie | Files touched by this commit (73) 
Log message:
biology: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 15:19:44 by Nia Alarie | Files touched by this commit (73) 
Log message:
biology: Remove SHA1 hashes for distfiles
   2015-11-02 19:42:23 by Alistair G. Crooks | Files touched by this commit (38) 
Log message:
Add SHA512 digests for distfiles for biology category.

Existing SHA1 digests verified, all found to be the same on the
machine holding the existing distfiles (morden).  Existing SHA1
digests retained for now as an audit trail.
   2013-04-06 15:24:21 by Blue Rats | Files touched by this commit (21) 
Log message:
".for variable names should not contain uppercase letters"
   2012-11-16 01:31:36 by Joerg Sonnenberger | Files touched by this commit (2) 
Log message:
Implicit int is not valid C++.
   2012-09-11 22:32:15 by Aleksej Saushev | Files touched by this commit (31) 
Log message:
"user-destdir" is default these days
   2009-06-14 19:34:35 by Joerg Sonnenberger | Files touched by this commit (21) 
Log message:
Remove @dirrm entries from PLISTs
   2008-05-26 04:13:26 by Joerg Sonnenberger | Files touched by this commit (274) 
Log message:
Second round of explicit pax dependencies. As reminded by tnn@,
many packages used to use ${PAX}. Use the common way of directly calling
pax, it is created as tool after all.