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biology/haplohseq,
Identify regions of allelic imbalance
Branch: CURRENT,
Version: 0.1.2.2nb1,
Package name: haplohseq-0.1.2.2nb1,
Maintainer: baconHaplohseq identifies regions of allelic imbalance (AI) in sequencing
data obtained from impure samples where AI events exist in a
potentially low proportion of cells in the sample. Input to the
software includes a VCF file of genotypes and estimated phased
genotypes.
Master sites:
Version history: (Expand)
- (2024-11-29) Updated to version: haplohseq-0.1.2.2nb1
- (2024-10-12) Package added to pkgsrc.se, version haplohseq-0.1.2.2 (created)
CVS history: (Expand)
2024-11-29 15:19:31 by Jason Bacon | Files touched by this commit (1) |
Log message:
biology/haplohseq: Unbreak build on Darwin
Uses deprecated C++ syntax
Force c++14 standard: Min for boost, max for haplohseq
|
2024-10-12 14:19:52 by Jason Bacon | Files touched by this commit (5) |
Log message:
biology/haplohseq: Identify regions of allelic imbalance
Haplohseq identifies regions of allelic imbalance (AI) in sequencing
data obtained from impure samples where AI events exist in a
potentially low proportion of cells in the sample. Input to the
software includes a VCF file of genotypes and estimated phased
genotypes.
|