./biology/py-macs3, Peak caller aimed at transcription factor binding sites

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Branch: CURRENT, Version: 3.0.1, Package name: py311-macs3-3.0.1, Maintainer: bacon

MACS (Model-based Analysis of ChIP-Seq) is a tool for identifying
transcription factor (TF) binding sites. Such sites are generated
by CHiP-Seq (CHromatin immuno-Precipitation sequencing) and ATAC-Seq
(Assay for Transposase Accessible Chromatin Sequencing). MACS
identifies "peaks" in the genome sequence, which are areas enriched
in bound TFs or accessible chromatin.

Master sites:

Filesize: 192773.866 KB

Version history: (Expand)

CVS history: (Expand)


   2024-02-28 14:38:48 by Jason Bacon | Files touched by this commit (4) 
Log message:
biology/py-macs3: Update to 3.0.1

Minor bug fix release
Changes: https://github.com/macs3-project/MACS/releases
   2024-01-12 10:51:58 by Jonathan Perkin | Files touched by this commit (1) 
Log message:
py-macs3: Fix PYTHON_VERSIONS_INCOMPATIBLE.
   2024-01-10 16:24:21 by Thomas Klausner | Files touched by this commit (1) 
Log message:
py-macs3: mark as not for Python 2
   2024-01-10 16:17:34 by Jason Bacon | Files touched by this commit (5) 
Log message:
biology/py-macs3: Peak caller for TF binding sites

MACS (Model-based Analysis of ChIP-Seq) is a tool for identifying
transcription factor (TF) binding sites.   Such sites are generated
by CHiP-Seq (CHromatin immuno-Precipitation sequencing) and ATAC-Seq
(Assay for Transposase Accessible Chromatin Sequencing).  MACS
identifies "peaks" in the genome sequence, which are areas enriched
in bound TFs or accessible chromatin.