./biology/py-macs3, Peak caller aimed at transcription factor binding sites

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Branch: CURRENT, Version: 3.0.2, Package name: py312-macs3-3.0.2, Maintainer: bacon

MACS (Model-based Analysis of ChIP-Seq) is a tool for identifying
transcription factor (TF) binding sites. Such sites are generated
by CHiP-Seq (CHromatin immuno-Precipitation sequencing) and ATAC-Seq
(Assay for Transposase Accessible Chromatin Sequencing). MACS
identifies "peaks" in the genome sequence, which are areas enriched
in bound TFs or accessible chromatin.

Master sites:

Filesize: 192855.96 KB

Version history: (Expand)

CVS history: (Expand)


   2024-11-11 08:29:31 by Thomas Klausner | Files touched by this commit (862) 
Log message:
py-*: remove unused tool dependency

py-setuptools includes the py-wheel functionality nowadays
   2024-10-15 07:59:04 by Adam Ciarcinski | Files touched by this commit (1) 
Log message:
py-macs3: no need for PYTHON_VERSIONS_INCOMPATIBLE=27
   2024-10-15 00:21:16 by Jason Bacon | Files touched by this commit (4) 
Log message:
biology/py-macs3: Update to 3.0.2

Some minor enhancements and improved docs
Changes: https://github.com/macs3-project/MACS/releases

Reported by:    portscout
   2024-10-14 08:46:10 by Thomas Klausner | Files touched by this commit (325) 
Log message:
*: clean-up after python38 removal
   2024-08-07 18:05:30 by Jonathan Perkin | Files touched by this commit (1) 
Log message:
py-macs3: Not for python39.
   2024-02-28 14:38:48 by Jason Bacon | Files touched by this commit (4) 
Log message:
biology/py-macs3: Update to 3.0.1

Minor bug fix release
Changes: https://github.com/macs3-project/MACS/releases
   2024-01-12 10:51:58 by Jonathan Perkin | Files touched by this commit (1) 
Log message:
py-macs3: Fix PYTHON_VERSIONS_INCOMPATIBLE.
   2024-01-10 16:24:21 by Thomas Klausner | Files touched by this commit (1) 
Log message:
py-macs3: mark as not for Python 2