./biology/sra-tools, NCBIs toolkit for handling data in INSDC Sequence Read Archives

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Branch: CURRENT, Version: 3.1.1, Package name: sra-tools-3.1.1, Maintainer: bacon

The SRA Toolkit and SDK from NCBI is a collection of tools and
libraries for using data in the INSDC (International Nucleotide
Sequence Database Collaboration) SRA (Sequence Read Archives). The
SRA house sequence reads and alignments generated by DNA/RNA
sequencers. The SRA Toolkit facilitates downloading sequence data,
performing filtering and conversions on-the-fly, thus saving enormous
amounts of time, bandwidth, and storage.

Master sites:

Filesize: 44681.748 KB

Version history: (Expand)

CVS history: (Expand)


   2024-11-19 21:22:32 by Jason Bacon | Files touched by this commit (10) 
Log message:
biology/sra-tools: Update to 3.1.1

Numerous fixes and enhancements since 3.0.6
Changes: https://github.com/ncbi/sra-tools/commits/master/

All previous patches upstreamed
Rewrote DESCR to be more introductory
   2024-11-14 23:22:33 by Thomas Klausner | Files touched by this commit (2429) 
Log message:
*: recursive bump for icu 76 shlib major version bump
   2024-11-01 13:55:19 by Thomas Klausner | Files touched by this commit (2426) 
Log message:
*: revbump for icu downgrade
   2024-11-01 01:54:33 by Thomas Klausner | Files touched by this commit (2427) 
Log message:
*: recursive bump for icu 76.1 shlib bump
   2024-08-25 08:19:21 by Thomas Klausner | Files touched by this commit (575) 
Log message:
*: replace CMAKE_ARGS with CMAKE_CONFIGURE_ARGS
   2024-05-29 18:35:19 by Adam Ciarcinski | Files touched by this commit (1929) | Package updated
Log message:
revbump after icu and protobuf updates
   2023-11-24 17:37:29 by Thomas Klausner | Files touched by this commit (1) 
Log message:
sra-tools: add missing Python dependency

Bump PKGREVISION
   2023-11-08 14:21:43 by Thomas Klausner | Files touched by this commit (2377) 
Log message:
*: recursive bump for icu 74.1