./biology/trimmomatic, Flexible read trimming tool for Illumina NGS data

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Branch: CURRENT, Version: 0.38, Package name: Trimmomatic-0.38, Maintainer: bacon

Trimmomatic performs a variety of useful trimming tasks for illumina
paired-end and single ended data. The selection of trimming steps and their
associated parameters are supplied on the command line. It works with FASTQ
(using phred + 33 or phred + 64 quality scores, depending on the Illumina
pipeline used), either uncompressed or gzipp'ed FASTQ.


Required to build:
[pkgtools/cwrappers]

Master sites:

Filesize: 129.538 KB

Version history: (Expand)

CVS history: (Expand)


   2021-10-26 12:03:45 by Nia Alarie | Files touched by this commit (73) 
Log message:
biology: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 15:19:44 by Nia Alarie | Files touched by this commit (73) 
Log message:
biology: Remove SHA1 hashes for distfiles
   2018-07-25 17:14:32 by Jason Bacon | Files touched by this commit (4) 
Log message:
biology/trimmomatic: import Trimmomatic-0.38

Trimmomatic performs a variety of useful trimming tasks for illumina
paired-end and single ended data. The selection of trimming steps and their
associated parameters are supplied on the command line. It works with FASTQ
(using phred + 33 or phred + 64 quality scores, depending on the Illumina
pipeline used), either uncompressed or gzipp'ed FASTQ.