./math/py-asdf, Advanced Scientific Data Format

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Branch: CURRENT, Version: 3.5.0, Package name: py312-asdf-3.5.0, Maintainer: pkgsrc-users

The Advanced Scientific Data Format (ASDF) is a next-generation interchange
format for scientific data.


Master sites:

Filesize: 785.704 KB

Version history: (Expand)


CVS history: (Expand)


   2024-04-21 20:04:31 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-asdf: updated to 3.2.0

3.2.0 (2024-04-05)

- Deprecate ``AsdfFile.version_map``
- Fix ``numpy.ma.MaskedArray`` saving for numpy 2.x
- Add ``float16`` support
- Removed unused ``asdf-unit-schemas`` dependency
   2024-03-17 10:57:09 by Adam Ciarcinski | Files touched by this commit (3) | Package updated
Log message:
py-asdf: updated to 3.1.0

3.1.0 (2024-02-27)

The ASDF Standard is at v1.6.0

- Cleanup ``asdf.util`` including deprecating: ``human_list``
  ``resolve_name`` ``minversion`` and ``iter_subclasses``

- Deprecate validation on ``AsdfFile.tree`` assignment. Please
  use ``AsdfFile.validate`` to validate the tree

- Deprecate validation during ``AsdfFile.resolve_references``. Please
  use ``AsdfFile.validate`` to validate the tree

- Deprecate ``asdf.asdf`` and ``AsdfFile.resolve_and_inline``

- Deprecate automatic calling of ``AsdfFile.find_references`` during
  ``AsdfFile.__init__`` and ``asdf.open``

- Allow views of memmapped arrays to keep the backing mmap
  open to avoid segfaults

- Introduce ``memmap`` argument to ``asdf.open`` that
  overrides ``copy_arrays`` with documentation that describes
  that the default for ``memmap`` when ``copy_arrays``
  is removed in an upcoming asdf release will be ``False`` and
  asdf will no longer by-default memory map arrays.

- Introduce ``asdf.util.load_yaml`` to load just the YAML contents
  of an ASDF file (with the option ``tagged`` to load the contents
  as a tree of ``asdf.tagged.Tagged`` instances to preserve tags)

- Require pytest 7+ and update asdf pytest plugin to be compatible
  with the current development version of pytest (8.1)

- Eliminate the use of the legacy ``tmpdir`` fixture in favor of
  the new ``tmp_path`` fixture for temporary directory creation.

- Remove conversion of warnings to errors in asdf pytest plugin. This
  prevented other warning filters (like those provided with ``-W``)
  from working. If you want these warnings to produce errors you can
  now add your own warning filter

- Only show ``str`` representation during ``info`` and ``search``
  if it contains a single line (and does not fail)
   2023-11-10 19:54:09 by Adam Ciarcinski | Files touched by this commit (3) | Package updated
Log message:
py-asdf: updated to 3.0.1

3.0.1 (2023-10-30)
------------------

The ASDF Standard is at v1.6.0

- Fix bug in ``asdftool diff`` for arrays within a list

3.0.0 (2023-10-16)
------------------

The ASDF Standard is at v1.6.0

- Drop support for ASDF-in-FITS.
- Add ``all_array_storage``, ``all_array_compression`` and
  ``all_array_compression_kwargs`` to ``asdf.config.AsdfConfig``
- Move built-in tags to converters (except ndarray and integer).
- Add block storage support to Converter
- Remove deprecated legacy extension API
- Fix issue opening files that don't support ``fileno``
- Allow Converters to defer conversion to other Converters
  by returning ``None`` in ``Converter.select_tag``
- Remove deprecated tests.helpers
- Remove deprecated load_custom_schema
- Remove deprecated TagDefinition.schema_uri
- Removed deprecated AsdfFile.open and deprecated asdf.open
  AsdfFile.write_to and AsdfFile.update kwargs
- Fix ``AsdfFile.info`` loading all array data
- Blank out AsdfFile.tree on close
- Move ndarray to a converter, add ``convert_unknown_ndarray_subclasses``
  to ``asdf.config.AsdfConfig``, move ``asdf.Stream`` to
  ``asdf.tags.core.Stream``, update block storage support for
  Converter and update internal block API
- Remove deprecated resolve_local_refs argument to load_schema
- Move IntegerType to converter and drop cache of converted values.
- Remove legacy extension API
- Fix bug that left out the name of the arrays that differed
  for ``asdftool diff`` comparisons
   2023-10-28 21:57:26 by Thomas Klausner | Files touched by this commit (516) | Package updated
Log message:
python/wheel.mk: simplify a lot, and switch to 'installer' for installation

This follows the recommended bootstrap method (flit_core, build, installer).

However, installer installs different files than pip, so update PLISTs
for all packages using wheel.mk and bump their PKGREVISIONs.
   2023-10-04 22:16:17 by Adam Ciarcinski | Files touched by this commit (2) | Package updated
Log message:
py-asdf: updated to 2.15.2

2.15.2 (2023-09-29)

The ASDF Standard is at v1.6.0

- Add support for python 3.12
   2023-08-30 22:04:46 by Adam Ciarcinski | Files touched by this commit (3) | Package updated
Log message:
py-asdf: updated to 2.15.1

2.15.1 (2023-08-07)
-------------------

The ASDF Standard is at v1.6.0

- Drop Python 3.8 support
- Drop NumPy 1.20, 1.21 support
- Convert numpy scalars to python types during yaml encoding
  to handle NEP51 changes for numpy 2.0
- Vendorize jsonschema 4.17.3

2.15.0 (2023-03-28)
-------------------

The ASDF Standard is at v1.6.0

- Require numpy<1.25 for python 3.8
- Add AsdfProvisionalAPIWarning to warn developers of new features that
  may undergo breaking changes but are likely to be included as stable
  features (without this warning) in a future version of ASDF
- Add AsdfDeprecationWarning to AsdfFile.blocks
- Document policy for ASDF release cycle including when support for ASDF versions
  end. Also document dependency support policy.
- Update lower pins on ``numpy`` (per release policy), ``packaging``, and \ 
``pyyaml`` to
  ones that we can successfully build and test against.
- Provide more informative filename when failing to open a file
- Add new plugin type for custom schema validators.
- Add AsdfDeprecationWarning to `~asdf.types.CustomType`
- Throw more useful error when provided with a path containing an
  extra leading slash
- Add AsdfDeprecationWarning to AsdfInFits. Support for reading and
  writing ASDF in fits files is being moved to `stdatamodels
  <https://github.com/spacetelescope/stdatamodels>`_.
- Add AsdfDeprecationWarning to asdf.resolver
- Add AsdfDeprecationWarning to asdf.tests.helpers.assert_extension_correctness
- Add AsdfDeprecationWarning to asdf.type_index
- Add warning to use of asdftool extract and remove-hdu about deprecation
  and impending removal
- Deprecate AsdfFile attributes that use the legacy extension api
- Add AsdfDeprecationWarning to asdf.types
- deprecate default_extensions, get_default_resolver and
  get_cached_asdf_extension_list in asdf.extension
- move asdf.types.format_tag to asdf.testing.helpers.format_tag
- Deprecate AsdfExtenion, AsdfExtensionList, BuiltinExtension
- Add AsdfDeprecationWarning to asdf_extensions entry point
- Deprecate asdf.tests.helpers
- respect umask when determining file permissions for written files
- rename master branch to main
   2023-08-02 01:20:57 by Thomas Klausner | Files touched by this commit (158)
Log message:
*: remove more references to Python 3.7
   2023-07-01 10:37:47 by Thomas Klausner | Files touched by this commit (105) | Package updated
Log message:
*: restrict py-numpy users to 3.9+ in preparation for update