Log message:
nut: removed in favor of biology/nutsqlite

Log message:
biology: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes

Log message:
biology: Remove SHA1 hashes for distfiles

Log message:
all: migrate some SourceForge homepage URLs back from https to http

https://mail-index.netbsd.org/pkgsrc-changes/2020/01/18/msg205146.html

In the above commit, the homepage URLs were migrated from http to https,
assuming that SourceForge would use the same host names for both http and
https connections. This assumption was wrong. Their documentation at
https://sourceforge.net/p/forge/documentation/Custom%20VHOSTs/ states
that the https URLs use the domain sourceforge.io instead.

To make the homepages from the above commit reachable again, pkglint has
been extended to check for reachable homepages. This check is only
enabled when the --network command line option is given.

Each of the homepages that referred to https://$project.sourceforge.net
before was migrated to https://$project.sourceforge.io (27), and if that
was not reachable, to the fallback URL http://$project.sourceforge.net
(163).

Log message:
all: migrate several HOMEPAGEs to https

pkglint --only "https instead of http" -r -F

With manual adjustments afterwards since pkglint 19.4.4 fixed a few
indentations in unrelated lines.

This mainly affects projects hosted at SourceForce, as well as
freedesktop.org, CTAN and GNU.

Log message:
Add SHA512 digests for distfiles for biology category.

Existing SHA1 digests verified, all found to be the same on the
machine holding the existing distfiles (morden).  Existing SHA1
digests retained for now as an audit trail.

Log message:
"user-destdir" is default these days

Log message:
Update nut to 15.8.
Based on PR#43776 by Kamel Derouiche for 15.7.

What's new in nut 15.8:
 * This release updates the USDA database to include some data corrections for
   milk.
 * The program's initial data load is now considerably faster.

What's new in nut 15.7:
 * This version includes an improvement to the automatic calorie tool to make it
   better able to hold fat mass or lean mass constant.
 * Also, there is now a facility to explicitly set the ratio between linoleic
   and alpha-linolenic acids.

What's new in nut 15.0:
 * This release introduces the new USDA Nutrient Database SR22 and allows
   current nut installations to have their existing meal records reinterpreted
   with the new database.

What's new in nut 14.5a:
 * The new feature "Weight Log Regression" does not tell you what you \ 
weigh;
   what it does is apply linear regression to a series of daily weight and body
   fat percentage entries to smooth out the random noise and tell you which
   direction your weight is trending, how fast it is going there, and how much
   of the change is lean or fat.

Log message:
Update to 14.4:

Changes: This release adds a feature that can automatically choose
food quantities when a meal is to have a particular amount of fat,
protein, or carbohydrate. Currently, you can modify a food quantity
from the meal list by typing the food number and a new quantity.
For example, "2 100g" means change food #2 to 100 grams. This
feature allows the user to type "protein", "carb", or \ 
"fat" instead
of an explicit new quantity. For example, "2 carb" indicates that
you want the second food's quantity changed so that the meal's
Daily Value for non-fiber carb is satisfied.

* 14.3

Changes: This release modifies the default polyunsaturated fat
reference values.

* 14.2

Changes: This release revises the default fatty acid reference
values.

* 14.1

Changes: This release updates the Omega-3 defaults.

* 14.0

Changes: This release introduces the new USDA Nutrient Database
SR21, and allows current nut installations to have their existing
meal records reinterpreted with the new database.

Log message:
Remove @dirrm entries from PLISTs