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wip/centrifuge,
Novel microbial classification engine
Branch: CURRENT,
Version: 1.0.4,
Package name: centrifuge-1.0.4,
Maintainer: bacon[Centrifuge] is a novel microbial classification engine that enables rapid,
accurate and sensitive labeling of reads and quantification of species on
desktop computers. The system uses a novel indexing scheme based on the
Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index, optimized
specifically for the metagenomic classification problem.
Required to run:[
lang/python37]
Required to build:[
pkgtools/cwrappers]
Master sites:
RMD160: c41adb0ddbe11fe2d3cfb1628f7701b64ae980cd
Filesize: 706.239 KB
Version history: (Expand)
- (2024-09-19) Package has been reborn
- (2024-09-15) Package deleted from pkgsrc
- (2023-02-13) Package has been reborn
- (2020-09-29) Package has been reborn
- (2020-09-29) Package deleted from pkgsrc
- (2020-01-02) Package has been reborn