NOTICE: This package has been removed from pkgsrc

./wip/plinkseq, C/C++ library for working with human genetic variation data

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Branch: CURRENT, Version: 0.08, Package name: plinkseq-0.08, Maintainer: jwbacon

PLINK/SEQ is an open-source C/C++ library for working with human genetic
variation data. The specific focus is to provide a platform for analytic tool
development for variation data from large-scale resequencing and genotyping
projects, particularly whole-exome and whole-genome studies. It is independent
of (but designed to be complementary to) the existing PLINK package.


Required to run:
[shells/bash] [wip/protobuf]

Required to build:
[devel/libtool-base]

Master sites:

SHA1: 8bff6b32750eee85559dda2c7c3cf9aea423a3d7
RMD160: bce0966ea5f25d8c1091157561aaf533a98595ec
Filesize: 2921.749 KB

Version history: (Expand)

CVS history: (Expand)


   2012-11-01 05:13:53 by Aleksej Saushev | Files touched by this commit (4) | Package removed
Log message:
Remove plinkseq, imported into pkgsrc as biology/plinkseq.
   2012-11-01 05:00:51 by Aleksej Saushev | Files touched by this commit (1) 
Log message:
More cosmetics.
   2012-11-01 04:59:35 by Aleksej Saushev | Files touched by this commit (1) 
Log message:
Some cosmetics.
   2012-11-01 04:49:17 by Aleksej Saushev | Files touched by this commit (4) 
Log message:
Convert to using pkgsrc/devel/protobuf.
   2012-09-14 19:30:35 by Aleksej Saushev | Files touched by this commit (1) 
Log message:
"user-destdir" is default these days.
   2012-09-14 19:08:01 by Aleksej Saushev | Files touched by this commit (1) 
Log message:
Drop gsed requirement, it is used to do what SUBST framework is for.
Link editor flags are better removed by BUILDLINK_TRANSFORM.
Replace bash path in scripts.
Fix project home page.
   2012-09-13 03:47:02 by Jason Bacon | Files touched by this commit (4) 
Log message:
Import plinkseq-0.08 as wip/plinkseq.

PLINK/SEQ is an open-source C/C++ library for working with human genetic
variation data. The specific focus is to provide a platform for analytic tool
development for variation data from large-scale resequencing and genotyping
projects, particularly whole-exome and whole-genome studies. It is independent
of (but designed to be complementary to) the existing PLINK package.