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wip/stringtie,
Transcript assembly and quantification for RNA-seq
Branch: CURRENT,
Version: 2.1.1,
Package name: stringtie-2.1.1,
Maintainer: baconStringTie is a fast and highly efficient assembler of RNA-seq alignments
into potential transcripts. The input can be the alignments of raw reads
as usual; it also accepts longer assembled sequences. The output can be
processed by downstream software including Ballgown, Cuffdiff, etc.
Master sites:
Filesize: 1923.747 KB
Version history: (Expand)
- (2023-07-19) Package added to pkgsrc.se, version stringtie-2.1.1 (created)