./wip/tophat, Fast splice junction mapper for RNA-Seq reads

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Branch: CURRENT, Version: 2.1.1, Package name: tophat-2.1.1, Maintainer: bacon

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq
reads to mammalian-sized genomes using the ultra high-throughput short read
aligner Bowtie, and then analyzes the mapping results to identify splice
junctions between exons.


Required to run:
[devel/boost-libs] [wip/bowtie2] [lang/python37]

Required to build:
[devel/boost-headers] [pkgtools/cwrappers]

Master sites:

SHA1: 33e81e57528520edd3e67bf2259e1f3a30998a3b
RMD160: 73c06278ad8bddacc3c83f1dd7f7da6e7dd148c2
Filesize: 2206.596 KB

Version history: (Expand)