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wip/xmatchview,
Genome alignment visualization
Branch: CURRENT,
Version: 1.2.5,
Package name: xmatchview-1.2.5,
Maintainer: pkgsrc-usersxmatchview, xmatchview-conifer and xmatchview-hive are imaging tools
for visualizing DNA/RNA sequence synteny. It allows users to align 2
(or 3) sequences in FASTA format using cross_match, minimap2 or any
aligners with .paf output capabilities, and displays the alignments in
a variety of image formats (png, tiff). xmatchview-hive outputs
xml-scalable vector graphics (svg).
Master sites:
Version history: (Expand)
- (2024-09-19) Package has been reborn
- (2024-09-15) Package deleted from pkgsrc
- (2023-02-13) Package has been reborn
- (2021-06-20) Package added to pkgsrc.se, version xmatchview-1.2.5 (created)