./math/R-DAAG, Data analysis and graphics data and functions

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Branch: CURRENT, Version: 1.25.4, Package name: R-DAAG-1.25.4, Maintainer: pkgsrc-users

Various data sets used in examples and exercises in the book
Maindonald, J.H. and Braun, W.J. (2003, 2007, 2010) "Data Analysis and
Graphics Using R".

Required to run:
[math/R] [graphics/R-latticeExtra]

Required to build:

Master sites: (Expand)

Version history: (Expand)

CVS history: (Expand)

   2022-12-18 07:22:34 by Makoto Fujiwara | Files touched by this commit (2) | Package updated
Log message:
(math/R-DAAG) Updated 1.24 to 1.25.4

Changes in DAAG version 1.25.1-3
   o A number of URLs have been updated.
   o The bomregions2021 dataset updates the bomregions data
     to 2021.
   o The dataset mdbAVtJtoD, with monthly Murray-Darling
     basin data from January 1950 through to February 2022,
     has been added.

Changes in DAAG version 1.25

  o Vignettes sources are now R Markdown, with the
    format bookdown::html_document2 format combined
    with base_format: rmarkdown::html_vignette
    (This combination allows automatic numbering of
    figures, and cross-references.)
  o The `bomregions2018` dataset updates `bomregions`
    to include data through to 2018.  The updates
    `bomregions2012` and `bomregions2015` have been
    omitted.  A further column `avDMI` has been added,
    holding values (from 1960 onwards) of the Annual
    average (Indian) Dipole Mode Index.
  o Web links on what is now the `bomregions2018` help
    page have been updated.  The url in the DESCRIPTION
    file now links to the development version of DAAG
    on the gitlab site.
  o The `head.injury` dataset (which was a copy of the
    `headInjury` dataset) has been removed.
  o Help pages for related data sets have, in several
    cases, been combined.

                 Changes in DAAG version 1.24-1

  o The dataset coralPval, holding 3072 p-values from a gene
    expression array comparison between post- and pre-settlement
    coral larvae, has been added.
  o The dataset bomregions2015 (updates bomregions to include data
    up to 2015) has been added.
  o The dataset lognihills, which replaces values in all 4 columns
    of nihills by log(values), has been added. Column names are
    logdist, logclimb, logtime and logtimef.
  o The generic function sumry(), with a method and print method
    for glm (but not other) objects, has been added.
  o The function DAAGtheme(), used to generate themes for use in
    an intended 4th edition of Data Analysis and Graphics Using R,
    has been added.
  o The functions CVlm() (alias cv.lm()), simulateLinear(),
    qreference() and sampdist() all now return lattice objects.
    If the result is returned to the command line, the graph is
    plotted just as before.

  o A line that subtracted 1 from the bottom and top margins,
    causing an error if the margin was already set to < 1, was
    removed from onetPermutation(), twot() and twotPermutation().
  o Code has been amended so that term labels ('term.labels') are
    given by attr(obj$terms, "term.labels").  The code now
    replaced expected to find 'term.labels' among the attributes
    of the summary object; this would have failed starting
    several R releases back.
   2021-10-26 12:56:13 by Nia Alarie | Files touched by this commit (458)
Log message:
math: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 16:28:36 by Nia Alarie | Files touched by this commit (458)
Log message:
math: Remove SHA1 hashes for distfiles
   2020-09-20 23:58:36 by Makoto Fujiwara | Files touched by this commit (2)
Log message:
(math/R-DAAG) Updated 1.22.1 to 1.24.

- NEWS.md not found but info is below:
   2019-08-08 21:53:58 by Brook Milligan | Files touched by this commit (189) | Package updated
Log message:
Update all R packages to canonical form.

The canonical form [1] of an R package Makefile includes the

- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
  needed), and CATEGORIES.

- HOMEPAGE is not present but defined in math/R/Makefile.extension to
  refer to the CRAN web page describing the package.  Other relevant
  web pages are often linked from there via the URL field.

This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.

[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html
   2018-07-28 16:40:53 by Brook Milligan | Files touched by this commit (126)
Log message:
Remove MASTER_SITES= from individual R package Makefiles.

Each R package should include ../../math/R/Makefile.extension, which also
defines MASTER_SITES.  Consequently, it is redundant for the individual
packages to do the same.  Package-specific definitions also prevent
redefining MASTER_SITES in a single common place.
   2018-05-31 02:56:33 by Wen Heping | Files touched by this commit (2)
Log message:
Update to 1.22

Upstream changes:
Changes in DAAG version 1.21

  o The dataset hurricNamed (deaths from Atlantic hurricanes,
    damage assessments, and other measures, from 1950 onwards)
    has been added.
  o The dataset cps3 (a subset of cps10 has been added
  o The help file CVlm.Rd has been amended to give the correct
    return value for CVlm() and cv.lm().
  o An enhanced version of overlapDensity()
    (an alias is  overlap.density()), as assumed by the code for
    Figure 13.3 on page 421 of the 3rd edition of "Data Analysis
    and Graphics using R", has replaced the former version.
   2015-11-04 00:33:46 by Alistair G. Crooks | Files touched by this commit (262)
Log message:
Add SHA512 digests for distfiles for math category

Problems found locating distfiles:
	Package dfftpack: missing distfile dfftpack-20001209.tar.gz
	Package eispack: missing distfile eispack-20001130.tar.gz
	Package fftpack: missing distfile fftpack-20001130.tar.gz
	Package linpack: missing distfile linpack-20010510.tar.gz
	Package minpack: missing distfile minpack-20001130.tar.gz
	Package odepack: missing distfile odepack-20001130.tar.gz
	Package py-networkx: missing distfile networkx-1.10.tar.gz
	Package py-sympy: missing distfile sympy-
	Package quadpack: missing distfile quadpack-20001130.tar.gz

Otherwise, existing SHA1 digests verified and found to be the same on
the machine holding the existing distfiles (morden).  All existing
SHA1 digests retained for now as an audit trail.