./math/R, Statistical language for data analysis and graphics

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Branch: CURRENT, Version: 4.4.2nb2, Package name: R-4.4.2nb2, Maintainer: pkgsrc-users

R is a language which bears a passing resemblance to the S language
developed at AT&T Bell Laboratories. It provides support for a
variety of statistical and graphical analyses. R is a true
computer language which contains a number of control-flow
constructions for iteration and alternation. It allows users to
add additional functionality by defining new functions. On
platforms which support the dlopen (3) interface, Fortran and C
code can be linked and called at run time.

R is very close to S in both syntax and semantics, but is not identical.
Whether this is a bug or feature is an open question.


Required to run:
[converters/libiconv] [www/curl] [graphics/tiff] [graphics/png] [graphics/cairo] [graphics/jpeg] [lang/perl5] [math/lapack] [math/blas] [devel/glib2] [devel/pango] [devel/gettext-lib] [devel/pcre] [devel/readline] [x11/tk] [lang/gcc7]

Required to build:
[pkgtools/x11-links] [x11/xcb-proto] [devel/libtool-fortran] [pkgtools/cwrappers] [x11/xorgproto]

Master sites: (Expand)

Filesize: 36701.938 KB

Version history: (Expand)


CVS history: (Expand)


   2024-11-22 16:28:52 by Jonathan Perkin | Files touched by this commit (1)
Log message:
R: Ensure all "-" are converted to "." in PKGVERSION.

math/R-robustbase is apparently the first package to use multiple "-" \ 
in its
R_PKGVER, resulting in 0.99-4-1 being parsed as version "1", and breaking a
bunch of DEPENDS matches.  Hopefully this fixes bulk builds without causing
any regressions.
   2024-11-14 23:22:33 by Thomas Klausner | Files touched by this commit (2429)
Log message:
*: recursive bump for icu 76 shlib major version bump
   2024-11-01 13:55:19 by Thomas Klausner | Files touched by this commit (2426)
Log message:
*: revbump for icu downgrade
   2024-11-01 08:12:59 by Makoto Fujiwara | Files touched by this commit (3)
Log message:
(math/R) Updated 4.4.1 to 4.4.2

CHANGES IN R 4.4.2:

  C-LEVEL FACILITIES:

         * The S-compatibility macros 'F77_COM' and 'F77_COMDECL'
           defined in header 'R_ext/RS.h' are deprecated and will be
           removed shortly.  We could find no record of their use.

  BUG FIXES:

         * Mathlib function 'lgammacor(x)' no longer warns about
           underflow to zero for large 'x'.

         * Text widths and heights were incorrectly reported by the
           Quartz device if the drawing context didn't exist yet
           (typically when drawing off-screen to a window that is yet
           to appear, see PR#18591).

         * The Quartz device could segfault in cases where paths with
           spaces are used in the new glyph drawing API.  Thanks to
           Tomek Gieorgijewski (PR#18758).

         * On macOS in R CRAN builds, it is again possible to read
           little-endian UTF-16 text with a BOM from a connection using
           'encoding="UTF-16"'.  Users building R from source should
           avoid using the system 'libiconv' in macOS 14.1 and later.

         * 'methods'' internal '.requirePackage()' now re-enables
           primitive method dispatch when needed; thanks to Ivan Krylov
           for demystifying CRAN package check failures on the R-devel
           mailing list.
   2024-11-01 01:54:33 by Thomas Klausner | Files touched by this commit (2427)
Log message:
*: recursive bump for icu 76.1 shlib bump
   2024-07-14 10:51:29 by Makoto Fujiwara | Files touched by this commit (3)
Log message:
(math/R) Updated 4.4.0 to 4.4.1

 R CMD Rdconv --type=txt /tmp/math/R/work/R-4.4.1/doc/NEWS.Rd | head -70
CHANGES IN R 4.4.1:

  C-LEVEL FACILITIES:

         * Functions 'R_atof' and 'R_strtod' declared in header
           'R_ext/Utils.h' are now documented in 'Writing R Extensions'
           and so formally part of the API.

         * The non-API entry points 'Rf_setSVector', 'Rf_StringFalse',
           'Rf_StringTrue' and 'Rf_isBlankString' have been added to
           those reported by 'R CMD check'.

         * The new function 'Rf_allocLang' is now available. This
           provides an alternative to the idiom of calling
           'Rf_allocList' followed by 'SET_TYPEOF'.

  UTILITIES:

         * 'R CMD check' now reports as warnings what 'gfortran' calls
           'Fortran 2018 deleted features', all of which have long been
           marked as 'obsolescent' and some of which were deleted in
           Fortran 2008 or earlier.  Fortran compilers are no longer
           required to support these.

  BUG FIXES:

         * 'as.numeric()', 'scan()', 'type.convert()' and other places
           which use the internal C function 'R_strtod' now require a
           _non-empty_ digit sequence in a decimal or binary exponent.
           This aligns with the C/POSIX standard for 'strtod' and with
           '?NumericConstants'.

         * 'as.data.frame(m, make.names=NA)' now works correctly for a
           matrix 'm' with 'NA''s in row names.

         * The error message from '<POSIXlt>[["hour"]]' and \ 
similar now
           mentions '*[[, "hour"]]', as wished for in PR#17409 and
           proposed by Michael Chirico.

         * 'qbinom()' and potentially 'qpois()', 'qnbinom()', no longer
           sometimes fail accurate inversion (of 'pbinom()', etc),
           thanks to Christopher Chang's report and patch in PR#18711.

         * The internal help server on Windows can again serve requests
           sent in quick succession, fixing a regression in R 4.4.0.

         * 'debugcall(<S3Generic>())' now also works when a
           corresponding S4-generic version is in the 'methods' cache
           (PR#18143).

         * Package 'tools'' 'toTitleCase(ch0)' now returns
           'character(0)' when 'ch0' is of zero length; fixing
           PR#18724, reported by David Hugh Jones.

         * 'R CMD check' is no longer broken (without a check result
           and no explanation in '00check.log') for a package which
           declares an invalid 'VignetteBuilder' in 'DESCRIPTION' but
           has no vignettes.
   2024-05-31 06:41:09 by Makoto Fujiwara | Files touched by this commit (1)
Log message:
(math/R) regen distino, sorry
   2024-05-29 18:35:19 by Adam Ciarcinski | Files touched by this commit (1929) | Package updated
Log message:
revbump after icu and protobuf updates