./math/R-coda, Output analysis and diagnostics for MCMC

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Branch: CURRENT, Version: 0.19.4.1, Package name: R-coda-0.19.4.1, Maintainer: minskim

coda provides functions for summarizing and plotting the output from
Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic
tests of convergence to the equilibrium distribution of the Markov
chain.


Required to run:
[math/R]

Required to build:
[pkgtools/cwrappers]

Master sites: (Expand)


Version history: (Expand)


CVS history: (Expand)


   2024-11-02 00:02:56 by Makoto Fujiwara | Files touched by this commit (2)
Log message:
(math/R-coda) Updated 0.19.4 to 0.19.4.1, make test passed

Explicit change Not described, easy check shows trimmed white space
at the end of line in following files

diff -urN coda-0.9.14/R/gelman.R coda/R/gelman.R
diff -urN coda-0.9.14/R/output.R coda/R/output.R
diff -urN coda-0.9.14/R/util.R coda/R/util.R

0.19-4 Martyn Plummer <martyn.plummer@gmail.com>
	- Fix cumuplot, affected by changes in matplot in R 4.0.0.
   2022-05-29 02:35:45 by Wen Heping | Files touched by this commit (2)
Log message:
Update to 0.19.4

Upstream changes:
0.19-4 Martyn Plummer <martyn.plummer@gmail.com>
	- Fix cumuplot, affected by changes in matplot in R 4.0.0.
   2021-10-26 12:56:13 by Nia Alarie | Files touched by this commit (458)
Log message:
math: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 16:28:36 by Nia Alarie | Files touched by this commit (458)
Log message:
math: Remove SHA1 hashes for distfiles
   2019-08-08 21:53:58 by Brook Milligan | Files touched by this commit (189) | Package updated
Log message:
Update all R packages to canonical form.

The canonical form [1] of an R package Makefile includes the
following:

- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
  needed), and CATEGORIES.

- HOMEPAGE is not present but defined in math/R/Makefile.extension to
  refer to the CRAN web page describing the package.  Other relevant
  web pages are often linked from there via the URL field.

This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.

[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html
   2018-07-28 16:40:53 by Brook Milligan | Files touched by this commit (126)
Log message:
Remove MASTER_SITES= from individual R package Makefiles.

Each R package should include ../../math/R/Makefile.extension, which also
defines MASTER_SITES.  Consequently, it is redundant for the individual
packages to do the same.  Package-specific definitions also prevent
redefining MASTER_SITES in a single common place.
   2018-03-04 02:03:32 by Min Sik Kim | Files touched by this commit (3)
Log message:
math/R-coda: Import version 0.19.1

coda provides functions for summarizing and plotting the output from
Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic
tests of convergence to the equilibrium distribution of the Markov
chain.