./math/R-pbkrtest, Parametric bootstrap & Kenward Roger based methods for mixed model comparison

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Branch: CURRENT, Version: 0.5.3, Package name: R-pbkrtest-0.5.3, Maintainer: pkgsrc-users

Test in linear mixed effects models. Attention is on linear mixed
effects models as implemented in the lme4 package. The package
implements a parametric bootstrap test. The package implements a
Kenward-Roger modification of F-tests.


Required to run:
[math/R] [math/R-lme4]

Required to build:
[pkgtools/cwrappers]

Master sites: (Expand)

Version history: (Expand)

CVS history: (Expand)


   2023-06-13 16:06:43 by Makoto Fujiwara | Files touched by this commit (2) 
Log message:
(math/R-pbkrtest) Updated 0.5.1 to 0.5.2

pbkrtest 0.5.2 (Release date: 2023-01-19)
============================================

Changes

* remat changed to restriction_matrix for increased readability
* WORDLIST file added
* Changes in reference to JSS paper
* Various changes in documentation
* Satterthwaite approximation now illustrated in vignette
* Fixed bug in computation of LRTstatistic. Thanks to Helle
  Sorensen for pointing it out.
   2021-10-26 12:56:13 by Nia Alarie | Files touched by this commit (458) 
Log message:
math: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 16:28:36 by Nia Alarie | Files touched by this commit (458) 
Log message:
math: Remove SHA1 hashes for distfiles
   2021-09-22 00:35:16 by Makoto Fujiwara | Files touched by this commit (1) 
Log message:
(math/R-pbkrtest) Fix build, +DEPENDS+=  R-knitr
   2021-09-19 04:32:27 by Makoto Fujiwara | Files touched by this commit (2) 
Log message:
(math/R-pbkrtest)  Updated 0.4.7 to 0.5.1

pbkrtest v0.5.1 (Release date: 2021-03-09)
============================================

Changes

* Improved documentation

pbkrtest v0.5-0.0 (Release date: 2020-08-04)
============================================

Changes

* Satterthwaite approximation added via the SATmodcomp function.

* Checks for models being nested is not performed for parametric
  bootstrap any longer. Reason is that the simr package use parametric
  bootstrap for testing variance components being zero.

* doi added to DESCRIPTION file

pbkrtest v0.4-8.6 (Release date: 2020-02-20)
============================================

Bug fixes:

* documentation fixed ddf_Lb is now exported

* mclapply issue for windows fixed

* vcovAdj.lmerMod is exported to make emmeans work. Contact Russ Lenth
  to make emmeans used generic function vcovAdj.

pbkrtest v0.4-8 (Release date: 2020-02-20)
==========================================

Bug fixes:

  * Issue related to class() versus inherits() fixed.

Changes:

  * NEWS file added
  * NAMESPACE file is now generated automatically
   2019-08-08 21:53:58 by Brook Milligan | Files touched by this commit (189) | Package updated
Log message:
Update all R packages to canonical form.

The canonical form [1] of an R package Makefile includes the
following:

- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
  needed), and CATEGORIES.

- HOMEPAGE is not present but defined in math/R/Makefile.extension to
  refer to the CRAN web page describing the package.  Other relevant
  web pages are often linked from there via the URL field.

This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.

[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html
   2019-07-31 22:09:59 by Brook Milligan | Files touched by this commit (1) | Package updated
Log message:
R-pbkrtest: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.
   2018-07-28 16:40:53 by Brook Milligan | Files touched by this commit (126) 
Log message:
Remove MASTER_SITES= from individual R package Makefiles.

Each R package should include ../../math/R/Makefile.extension, which also
defines MASTER_SITES.  Consequently, it is redundant for the individual
packages to do the same.  Package-specific definitions also prevent
redefining MASTER_SITES in a single common place.