./wip/kallisto, Quantify abundances of transcripts from RNA-Seq data

[ CVSweb ] [ Homepage ] [ RSS ] [ Required by ] [ Add to tracker ]


Branch: CURRENT, Version: 0.46.1, Package name: kallisto-0.46.1, Maintainer: bacon

Kallisto is a program for quantifying abundances of transcripts from RNA-Seq
data, or more generally of target sequences using high-throughput sequencing
reads. It is based on the novel idea of pseudoalignment for rapidly determining
the compatibility of reads with targets, without the need for alignment.


Required to run:
[devel/hdf5] [biology/htslib] [archivers/libaec]

Required to build:
[pkgtools/cwrappers]

Master sites:

SHA1: e39adb9801049836dcd7ac52e775f64af4d0a51b
RMD160: 8e42c5c52f19ec2e37f8591f7472a969b479bfd4
Filesize: 2201.719 KB

Version history: (Expand)