./wip/py-cogent, Cogent A toolkit for statistical analysis of biological sequences

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Branch: CURRENT, Version: 1.4.1, Package name: py27-cogent-1.4.1, Maintainer: jihbed.research

A toolkit for making sense from sequence. PyCogent includes connectors
to remote databases, built-in generalized probabilistic techniques for working
with biological sequences, and controllers for 3rd party applications


Required to run:
[graphics/py-matplotlib] [lang/py-pyrex] [databases/py-sqlalchemy] [lang/python27] [math/py-numpy16]

Required to build:
[pkgtools/cwrappers]

Master sites:

RMD160: 1e23a7df111fafe546f34a0820b9cf5f3e1e9f8e
Filesize: 2535.881 KB

Version history: (Expand)


CVS history: (Expand)


   2014-05-09 09:38:42 by Thomas Klausner | Files touched by this commit (229)
Log message:
Mark packages that are not ready for python-3.3 also not ready for 3.4,
until proven otherwise.
   2014-01-25 11:38:08 by Thomas Klausner | Files touched by this commit (171) | Package updated
Log message:
Mark packages as not ready for python-3.x where applicable;
either because they themselves are not ready or because a
dependency isn't. This is annotated by
PYTHON_VERSIONS_INCOMPATIBLE=  33 # not yet ported as of x.y.z
or
PYTHON_VERSIONS_INCOMPATIBLE=  33 # py-foo, py-bar
respectively, please use the same style for other packages,
and check during updates.

Use versioned_dependencies.mk where applicable.
Use REPLACE_PYTHON instead of handcoded alternatives, where applicable.
Reorder Makefile sections into standard order, where applicable.

Remove PYTHON_VERSIONS_INCLUDE_3X lines since that will be default
with the next commit.

Whitespace cleanups and other nits corrected, where necessary.
   2012-10-06 19:55:21 by Aleksej Saushev | Files touched by this commit (31)
Log message:
Drop superfluous PKG_DESTDIR_SUPPORT, "user-destdir" is default these days.
Mark packages that don't or might probably not have staged installation.
   2010-04-13 18:18:41 by Kamel Derouiche | Files touched by this commit (4) | Imported package
Log message:
Import py26-cogent-1.4.1 as wip/py-cogent.

A toolkit for making sense from sequence. PyCogent includes connectors
to remote databases, built-in generalized probabilistic techniques for working
with biological sequences, and controllers for 3rd party applications