./wip/py-sima, Software for analysis of sequential imaging data

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Branch: CURRENT, Version: 0.3.2, Package name: py312-sima-0.3.2, Maintainer: jihbed.research

SIMA (Sequential IMage Analysis) is an Open Source package for analysis of
time-series imaging data arising from fluorescence microscopy.
The functionality of this package includes:

correction of motion artifacts
segmentation of imaging fields into regions of interest (ROIs)
extraction of dynamic signals from ROIs

The included ROI Buddy software provides a graphical user interface (GUI)
supporting the following functionality:

manual creation of ROIs
editing of ROIs resulting from automated segmentation
registration of ROIs across separate imaging sessions


Required to run:
[math/py-numpy] [lang/python37]

Required to build:
[pkgtools/cwrappers]

Master sites:

RMD160: 3971ccf236030d1c61357524fa725fa5933c632a
Filesize: 2488.424 KB

Version history: (Expand)