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wip/py-engfmt Read and write in engineering notation
wip/feynedit Tool for drawing Feynman diagrams
wip/libxc Libxc is the ETSF library of exchange-correlation functionals
wip/py-control Python Control Systems Library
wip/netlogo NetLogo is a multi-agent programmable modeling environment
wip/gfan Program for computing with Groebner fans
wip/xmds XMDS is a code generator that integrates equations
wip/frobby Computations with monomial ideals
wip/py-symeig Symmetrical eigenvalue routines for NumPy
wip/libscscp Library of the Symbolic Computation Software Composibility Protocol
wip/py-nzmath Number theory oriented calculation system
wip/py-algebraic Algebraic modeling system for Python
wip/py-cbc Gravitational wave CBC analysis toolkit
wip/oneloop Evaluate the one-loop scalar 1-point, 2-point, 3-point
wip/cartago Framework for programming and executing environments in multi-agent
wip/kstest Kolmogorov-Smirnov Test Statistic with High Precision
wip/py-parameters Hierarchical parameter sets for modelling and simulation
wip/py-nosh Nonlinear Schrodinger equations
wip/py-vespa Calculate astrophysical false positive probabilities
wip/py-pynn Python package for neuronal network models
wip/py-fmmlib Python wrappers for particle FMMs
wip/py-pyec Evolutionary computation package
wip/lcalc Lcalc is a program for calculating with L-functions
wip/py-mark RDF Bookmarking Utilities
wip/py-cf-python Python interface to the CF data model
wip/lissac Lisaac is the first compiled POO based on prototype concepts
wip/py-ionize Package for calculating electrolyte properties.
wip/py-fnss Fast creation and configuration of topologies, traffic matrices
wip/libcuba Library for multidimensional numerical integration
wip/hztool Robust model-to-data comparisons
wip/py-utilib_component_core The PyUtilib Component Architecture
wip/py-odesys Straightforward numerical integration of ODE systems from SymPy
wip/tmva Toolkit for Multivariate Data Analysis with ROOT
wip/nsc2ke Navier-Stokes solver
wip/py-scitools Python library for scientific computing
wip/py-tklsystem Tkinter interface to work with L-System equations
wip/py-rpncalc RPN Calculator For Python
wip/linbox LinBox: exact computational linear algebra
wip/py-cma Covariance Matrix Adaptation Evolution Strategy for non-linear
wip/mtrxmath Small tool for matrix mathematics
wip/py-hydrointerp Function for interpolating hydrologic features
wip/py-bxa Bayesian X-ray spectral analysis
wip/spai Sparse Approximate Inverses
wip/py-metrics Metrics for python files
wip/probcons Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences
wip/spatt Statistics for Patterns
wip/py-hessianfree Hessian-free optimization for deep networks
wip/py-calphad Thermodynamic models, calculating phase diagrams
wip/py-scikit-monaco Python modules for Monte Carlo integration
wip/py-qmath Provides a class for deal with quaternion algebra and 3D rotation
wip/py-mathjspy Evaluate mathematical expressions in the same manner as MathJS
wip/py-spglib Python bindings for finding and handling crystal symmetries
wip/py-z2pack Computation of topological numbers of band-structures
wip/py-qsymm Symmetry finder and symmetric Hamiltonian generator
wip/thepeg Toolkit for High Energy Physics Event Generation
wip/py-rebound Open-source multi-purpose N-body code
wip/py-scs Scs: splittling cone solver
wip/py-pypol Python module to manage monomials and polynomials
wip/py-otb Utility functions for scientific numerical computation
wip/py-quantities Support for physical quantities with units, based on numpy
wip/py-multivar-horner Multivariate Horner scheme for evaluating multivariate polynomials
wip/py-cmtoolkit Unofficial Python port of the conformalmapping MATLAB toolbox
wip/tvmet Tiny Vector and Matrix template library
wip/libzn-poly Libzn_poly is a C library for polynomial arithmetic in Z/nZ[x]
wip/py-cnfgen CNF formula generator
wip/py-fiona Fiona reads and writes spatial data files
wip/py-pymbolic Python package for symbolic computation
wip/py-debinning The bias inherent when binning data into histograms
wip/py-algopy ALGOPY: Taylor Arithmetic Computation and Algorithmic Differentiation
wip/py-ecspy Framework for creating evolutionary computations in Python
wip/py-scikit-nano Python toolkit for generating nano-structures
wip/py-chaospy Numerical tool for perfroming uncertainty quantification
wip/py-upsilon Automated Classification of Periodic Variable Stars
wip/py-qnet Tools for symbolically analyzing quantum feedback networks
wip/py-qexpy Analysis and data plotting aimed at undergraduate physics
wip/palp Analyzing lattice polytopes
math/py-patsy Python package for describing statistical models
wip/py-polynomial Package defining mathematical single-variable polynomials
wip/fastjet Software package for jet finding in pp and e+e- collisions
wip/py-poissongeometry Local Poisson-Nijenhuis calculus on Poisson manifolds
wip/libncl The NEXUS Class Library is a C++ library for parsing NEXUS files
wip/py-louvain Methods of community detection in large networks
wip/py-gpy The Gaussian Process Toolbox
wip/fxrays Computes extremal rays with filtering
wip/py-prody Python Package for Protein Dynamics Analysis
wip/py-gravipy Tensor Calculus Package for General Relativity
wip/py-grtipy General Relativity toolbox in python
wip/py-constraint Python module implementing support for handling CSPs
wip/py-scipy-data_fitting Data fitting system with SciPy
wip/py-gratelpy Graph theoretic linear stability analysis
wip/depsolver Multimaterial 3D electrostatic solver
wip/py-utilib_component_config Extensions for configuring components in PyUtilib
wip/py-fdasrsf Functional data analysis using the square root slope framework
wip/py-raphrase Linguistics-related library
wip/py-lifelines Including Kaplan Meier, Nelson Aalen and regression
wip/py-pysb Python Systems Biology modeling framework
wip/py-smop Matlab/Octave to Python compiler
wip/ised Tool for generating number sequences and arithmetic evaluation
wip/py-goreutilities Some utility functions useful for GoreLab members
wip/py-pweave Scientific reports with embedded python computations
wip/py-pydy-viz Browser based 3D visualization of multibody simulations
wip/liboglappth Support libraries of science/ghemical port
wip/py-sym Unified wrapper for symbolic manipulation libraries in Python
wip/py-qiskit Software for developing quantum computing programs
wip/py-qutip Quantum Toolbox in Python
wip/py-toeplitz Wrapper for fortran 90 toeplitz package
wip/py-viz-comms Bidirectional communication for the PyViz ecosystem
wip/py-tinyarray Arrays of numbers for Python, optimized for small sizes
wip/flint Fast Library for Number Theory
wip/py-sofa Python ctypes wrapper around the SOFA astronomical library
wip/py-amply Allows you to load and manipulate AMPL/GLPK data as Python
wip/dune-istl Iterative Solver Template Library
math/py-netCDF4 Object-oriented python interface to netCDF version 4
wip/picosat SAT solver with proof and core support
wip/py-EMpy Suite of numerical algorithms widely used in electromagnetism
wip/py-acq4 Neurophysiology acquisition and analysis platform
wip/py-aerocalc Aeronautical Engineering Calculations
wip/py-affine Matrices describing affine transformation of the plane
wip/getdp General environment for the treatment of discrete problems
wip/py-blaze NumPy and Pandas interface to Big Data
wip/py-chainer Flexible framework of neural networks
wip/py-chealpy Python Binding of chealpix
wip/clasp Answer set solver for normal and disjunctive logic programs
wip/py-clnum Rational and arbitrary precision floating point numbers
wip/nyh-hoc High Order Calculator
wip/alberta Adaptive hierarchical finite element toolbox
wip/py-cogent Cogent A toolkit for statistical analysis of biological sequences
wip/py-concepts Formal Concept Analysis with Python
wip/py-csb Computational Structural Biology Toolbox
wip/py-dcpf Python device communications protocol framework
wip/py-dimarray Numpy array with labelled dimensions and axes, dimension
wip/py-cesium Machine Learning for Time Series Analysis Platform
wip/py-dolo Economic modelling in Python
wip/dune-geometry Includes everything related to the DUNE reference elements
wip/py-fluiddyn Framework for studying fluid dynamics.
wip/minuit2 MINUIT is a physics analysis tool for function minimization
wip/py-da Pyda is a general object-oriented data assimilation package
wip/py-goulib Library of useful Python code for scientific + technical applications
wip/py-icane Python wrapper for ICANE Statistical Data and Metadata API
wip/py-jelly Abstraction layer for running numerical hydrodynamics software
wip/py-lenstools Toolkit for Weak Gravitational Lensing analysis
wip/py-linop Pythonic abstraction for linear mathematical operators
wip/py-mailingstats Mailing List Stats is a tool to parse and analyze mail boxes
wip/py-mapy-package Modeling and Analysis in Python
wip/py-math-braid Pure python braid group implementation based on sympy
math/py-abcpmc Approximate Bayesian Computation Population Monte Carlo
wip/libfplll Library for LLL-reduction of Euclidean lattices
wip/py-ncomb Python combinatorics library
wip/py-neurolab Simple and powerfull neural network library for python
wip/py-gts Python bindings for GNU Triangulated Surface Library
wip/libecc C++ elliptic curve library
wip/py-oasa Python library for manipulation of chemical formats
wip/py-optlang Formulate optimization problems and solve using SymPy
wip/xtensor Multi-dimensional arrays with broadcasting and lazy computing
wip/lhapdf Les Houches Accord PDF library and interface
wip/bagel Domain specific compiler for lattice QCD
wip/py-paida Pure Python scientific analysis package
wip/py-pykit-shared Collection of modules shared amongst my other projects
wip/py-pyphant Workflow modelling app
math/py-xarray N-D labeled arrays and datasets in Python
wip/py-quaternionarray Python package for fast quaternion arrays math
wip/py-radontea Collection of algorithms to compute the inverse Radon transform
wip/probe ProBE is an animator for CSP processes
wip/py-atmos Atmospheric sciences utility library
wip/py-cclib Parsers and algorithms for computational chemistry
wip/py-sfg Python package for symbolic signal flow graph analysis
wip/py-cxnet Complex networks in education
wip/py-dynamicisttoolkit Various tools for theoretical and experimental dynamics
wip/atompaw Projector Augmented Wave code for electronic structure calculations
wip/py-sode Python/Cython lib for solving Stochastic Ordinary Differential Equations
wip/py-holoviews Plotting your data annotate your data and let it visualize itself
wip/py-spatious Distance and geometry utilities
wip/py-ncpol2sdpa Converter from noncommutative variables to sparse SDPA
wip/py-feyn Easy-to-use Python library to help physicists draw Feynman diagrams
wip/py-poisson-approval Poisson Approval studies the Poisson Game of Approval Voting
wip/py-ibmiotf Python Client for IBM Watson IoT Platform
wip/mppp Multiprecision for modern C++
wip/adept Combined automatic differentiation and array library for C++
math/py-scikit-image Image processing routines for SciPy
wip/mopac7 Semi-empirical Quantum Chemistry Library
wip/lrslib Enumerate vertices and extreme rays of a convex polyhedron
wip/py-mpop Meteorological post processing package
wip/py-vegas Tools for adaptive multidimensional Monte Carlo integration
wip/gm2calc Calculation of the anomalous magnetic moment of the muon
wip/symbolic++ C++ and POO programming to develop a computer algebra system
wip/orbifolder Study the Low Energy Effective Theory of Heterotic Orbifolds
wip/py-stats-arrays Standard NumPy array interface for defining uncertain parameters
wip/py-markovchain Simple markov chain implementation
wip/py-colorpy Handling physical descriptions of color and light spectra
wip/py-debacl Density-Based Clustering
wip/py-inspyred Bio-inspired computational intelligence algorithms in Python
wip/py-jitcdde Just-in-Time Compilation for Delay Differential Equations
wip/py-nimfa Python Library for Nonnegative Matrix Factorization Techniques
wip/py-arxiv-connections Python package used to visualize academics and find related people
wip/py-semopy Structural Equation Modeling Optimization in Python
wip/py-talk2stat Python package to communicate with statistical software
wip/py-dit Python package for information theory
wip/py-cosmoTransitions Zero-temperature cosmological phase transitions
wip/py-fcsparser Python package for reading raw fcs files
wip/py-jitcode Just-in-Time Compilation for Ordinary Differential Equations
wip/py-kineticlib Library for kinetic theory calculations in the multi-temperature
wip/py-nibabel Access a multitude of neuroimaging data formats
wip/py-numpoly Polynomials as a numpy datatype
wip/py-psychopy Psychology and neuroscience software in python
wip/py-pysph General purpose Smoothed Particle Hydrodynamics framework
wip/py-scikits_image Image processing routines for SciPy
wip/py-sempy Python implementation of the spectral element method
wip/py-utilib_math PyUtilib math utilities
wip/py-sunpy Python for Solar Physicists
wip/py-ppscore Python implementation of the Predictive Power Score
wip/py-pyon Lattice QCD library including statistical, fitting, plotting functions
wip/py-pyquante Quantum chemistry in Python
wip/py-scimath Scientific and Mathematical calculations
wip/py-sdt_metrics Signal Detection Theory (SDT) metrics for Python
wip/jason Java-based interpreter for an extended version of AgentSpeak
wip/py-gensim Python framework for fast Vector Space Modelling
wip/py-varify Clinical DNA Sequencing Analysis and Data Discovery
wip/py-rainbownum Python package to solve anti-Schur equations
wip/py-constructive-geometries Simple tools to define world locations from a set of topological faces and set algebra
wip/py-larlib Linear algebraic representation of topology and geometry
wip/py-vispy Interactive visualization in Python
wip/py-gotran Declarative language describing ordinary differential equations
wip/oslc Open Source License Checker
wip/py-luminous Optical Transfer Matrix and simple Quantum Well modelling
wip/py-pydelay Translates a system of delay differential equations (DDEs)
wip/py-opensimplex OpenSimplex n-dimensional gradient noise function.
devel/py-cytoolz Cython Toolz High performance functional utilities
devel/py-joblib Set of tools to provide lightweight pipelining
devel/py-h5py Python interface to the HDF5 library
wip/py-qit Quantum Information Toolkit
wip/dispred Tools for calculating DIS cross sections at LO and NLO in QCD
wip/py-solpy Solar Performance and Design library
wip/py-numdifftools Solves automatic numerical differentiation problems
wip/etos Efficient technology of spike-sorting
wip/py-decode Dynamic programming toolkit
wip/py-clid Simple vector mathematics library
wip/polylib The polyhedral library - long int version
wip/py-gosam Automated One-Loop matrix element generator
wip/py-irco International Research Collaboration Graphs
wip/py-mahotas Mahotas: Computer Vision Library
wip/csp2b The csp2B Tool written in Moscow ML
wip/py-cva Calculus of Variations Solver
wip/py-scikits_talkbox Talkbox, a set of python modules for speech/signal processing
wip/spot Library for omega automata manipulation and model checking
wip/py-geopandas Geographic pandas extensions
wip/py-vtk PyVTK - tools for manipulating VTK files in Python
wip/py-hepcrawl Scrapy project for feeds into INSPIRE-HEP
textproc/py-numpydoc Sphinx extension to support docstrings in Numpy format
math/py-statsmodels Statistical computations and models for Python
devel/why3 Platform for deductive program verification
wip/py-cosmolopy Python for Cosmology
wip/py-griddata Interpolate irregularly spaced data to a grid
wip/py-neuronpy The NEURON simulator and analyzing neural data
wip/agile Interface for a variety of Fortran-based Monte Carlo generators
wip/py-symcxx SymCXX is an experimental Python for symbolic manipulation
wip/py-meshio I/O for various mesh formats
wip/py-complexsystems Toolbox for Complex Sytems
wip/fftjet Multiresolution jet reconstruction in the Fourier domain
wip/py-hybridlfpy Methods to calculate LFPs with spike events from network sim
wip/py-divisi2 Commonsense Reasoning over Semantic Networks
wip/bertini Software for Numerical Algebraic Geometry
wip/py-pykit-sci Collection of python modules for science
wip/py-downhill Stochastic optimization routines for Theano
wip/py-delay Python tool for solving delay differential equations
wip/py-thermistor Thermistor voltage to temperature and associated utilites
wip/faast Library for Fast Arithmetics in Artin-Schreier Towers
wip/cddlib C-library implementation of the Double Description Method
wip/jmol Jmol: an open-source Java viewer for chemical structures in 3D
wip/py-cosat bindings to picosat (a SAT solver)
wip/mmdb Macromolecular coordinate library
wip/py-sparse Sparse multi-dimensional arrays for the PyData ecosystem
wip/py-dubins Code to generate and manipulate dubins curves
wip/py-brian Simulator for spiking neural networks
wip/py-scikits_scattpy Light Scattering methods for Python
wip/py-pyentropy Python module for estimation information theoretic quantities
wip/py-arxvier Unofficial API tool for scientific publications
wip/py-symEnergy Lagrange multiplier based energy market toy modeling framework
wip/rk Relativistic Kinematics
wip/elk All-electron full-potential linearised augmented-planewave
wip/pythia6 Program can be used to generate high-energy-physics events
wip/aokell AOKell is a Java implementation of the Fractal component model
wip/py-verilog Python-based Hardware Design Processing Toolkit for Verilog HDL
wip/py-math-snappy Program for studying the topology and geometry of 3-manifolds
wip/py-smcp Python extension for solving sparse matrix cone programs
wip/py-twistml TWItter STock market Machine Learning package
wip/dvegas Parallel Adaptive Monte Carlo Integration in C++
wip/pilemc-svn Tool for the simulation of pile-up events at HepMC level
wip/py-chemview Interactive molecular viewer for IPython notebook
wip/cubature Multi-dimensional integration
wip/gappa Formal tool for certifying numerical applications
wip/py-sdeint Numerical integration of stochastic differential equations
wip/py-descartes Use geometric objects as matplotlib paths and patches
wip/py-cameo Computer aided metabolic engineering & optimization
wip/py-mdtraj The analysis of molecular dynamics trajectories
wip/py-gem Math library for game programming in python
wip/py-fwarp Tool to wrap Fortran 77/90/95 code in C, Cython & Python
wip/py-pseudorandom Generating pseudorandom condition/stimulus for psychological
wip/hepmcvisual Interactive Browser for HepMC events
wip/gmm Gmm++ is a generic C++ template library for sparse
wip/py-nptdms NumPy based module for reading TDMS files produced by LabView
wip/py-fanova Functional ANOVA
wip/py-cerridwen Accurate solar system data for everyone
wip/py-safersympify Safer way to sympify unsanitized input
wip/libm4ri Method of the Four Russians Inversion library, shared library
wip/py-halp Hypergraph Algorithms Package
wip/py-euclidean Euclidean Geometry Library
wip/spectra Header-only C++ library for large scale eigenvalue problems
wip/py-sppy Sparse matrix package based on Eigen
wip/py-ssp Python speech signal processing library for education
wip/py-fluids Fluid dynamics component of Chemical Engineering Design Library
wip/py-pymatgen Genomics is a robust materials analysis for structures and molecules
wip/py-gdxcc Python library to access and modify gdx files
wip/py-hdf5storage Utilities to read/write Python types to/from HDF5 files
wip/polymul Fast multivariate polynomial multiplication in C++
wip/py-qiskit-ignis Qiskit tools for quantum information science
wip/py-neqsys Numerical solving of symbolic systems of non-linear equations
wip/py-qubovert Formulating, simulating,and solving problems in boolean and spin
wip/py-gslodeiv2 Python binding for odeiv2 in GNU Scientific Library (GSL)
wip/qrint Orthonormal integrators
wip/py-gauss Python API for Analysis of Gaussian Quantum Chemical Compuations
wip/py-traits Manifest typing and reactive programming for Python
wip/py-escher Build, view, share, and embed pathway maps
wip/py-spherical-functions Implementation of Wigner D Matrices, spin-weighted spherical harmonics
wip/py-epipy Python tools for epidemiology
wip/py-poppy Physical optics propagation for optical simulations
wip/py-hickle Hickle - an HDF5 based version of pickle
wip/py-quaternions Package to handle quaternions
wip/py-sumatra Tracking projects based on numerical simulation or analysis
wip/schur Calculating properties of Lie groups and symmetric functions
wip/jython Python for the Java Platform
wip/plasti Plasti is a 2D ALE (Arbitrary Lagrangian Eulerian) code
wip/sector-decomposition Used to compute numerically the Laurent expansion of Feynman integrals
wip/feynhiggs Fortran code for the diagrammatic calculation of the masses
wip/py-plink Link Projection Editor
wip/py-fssa Package for finite-size scaling analysis at phase transitions
wip/py-parakeet Runtime compiler for numerical Python
wip/py-pseudopy Compute and visualize pseudospectra of matrices
wip/py-delny Python module for delaunay triangulation
wip/py-traceInv Computes the trace of the inverse of matrix or linear matrix function
wip/py-julio Python Implementation of the Fractal Specification
wip/py-nupic Numenta Platform for Intelligent Computing
wip/py-numberjack Python platform for combinatorial optimization
wip/qcdloop Repository of one-loop scalar Feynman integrals
wip/cmetrics Size and complexity metrics for C source code files
wip/py-qitensor Quantum Hilbert Space Tensors in Python and Sage
wip/cliquer C routines for finding cliques in an arbitrary weighted graph
wip/herwig Monte Carlo package for simulating Hadron Emission Reactions
wip/py-gwsurrogate Easy to use interface to gravitational wave surrogate models
wip/py-qequ Command-line quadratic equation solver
wip/py-rf Receiver function calculation in seismology
wip/py-sym2num Sympy to numpy code generator
wip/lbt Converts from LTL formulas to B├╝chi automata
wip/py-lcapy Symbolic linear circuit analysis
wip/py-topkapi TOPKAPI hydrological model in Python
wip/py-idx2numpy Provides tools to convert files to and from IDX format
wip/simpa Agent-oriented framework for concurrent, multi-core, distributed programming
wip/py-chaos UIC REU on Chaos, Fractals and Complex Dynamics
wip/py-exocode Automation of debris disk detection
wip/py-cobrapy Package for constraints-based modeling of biological networks
wip/py-qiskit-aqua Qiskit Aqua: An extensible library of quantum computing algorithms
wip/py-pyflation Calculating cosmological perturbations during an inflationary
wip/libode Open Dynamics Engine
wip/py-neupy Artificial Neural Network library implemented in Python
wip/py-gerrychain Markov chain Monte Carlo to analyze districting plans and gerrymanders
wip/libpsurface Library that handles piecewise linear bijections
wip/py-corrfitter Utilities for fitting correlators in lattice QCD
wip/py-riccipy Tensor algebra calculator for General Relativity
wip/py-spatialdata Spatialdata provides transformations among coordinate systems
wip/py-adsbibdesk Add papers from or NASA/SAO ADS to your BibDesk bibliography
wip/libqd Double-double and quad-double package for Fortran and C++
wip/py-qupulse Quantum compUting PULse parametrization and SEquencing framework
wip/py-gvar Utilities for manipulating Gaussian random variables
wip/higgsbounds Selection of Higgs sector predictions for any particular model
wip/py-textx Domain-Specific Languages and parsers in Python made easy
wip/py-gnm Python Gaussian Network Model
wip/py-aopython Aspect Oriented Python
wip/py-mdp Modular toolkit for data processing
wip/py-mystic Constrained non-convex optimization and uncertainty quantification
wip/py-recluse Reproducible Experimentation for Computational Linguistics Use
wip/py-scikit-aero Aeronautical engineering calculations in Python
wip/py-lds Learning and inference for Gaussian linear dynamical systems
wip/py-tardis-sn TARDIS - Temperature And Radiative Diffusion In Supernovae
wip/py-gammafit Derivation of non-thermal particle distributions MCMC spectraly
wip/py-bigfloat Arbitrary precision correctly-rounded floating point arithmetic
wip/py-flipper Manipulating curves and measured laminations on surfaces
wip/py-repositoryhandler RepositoryHandler is a python library for handling code repositories
wip/givaro C++ library for arithmetic and algebraic computations
wip/lie Computer algebra package for Lie group computations
wip/py-pysal Python Spatial Analysis Library
wip/py-tracks Analysis tools for Molecular Dynamics and Monte Carlo simulations
wip/py-christofides Christofides Algorithm for TSP
wip/py-ahoy Agent-based simulations of active particles
wip/py-efmlrs Extracts EFMs from result file of mplrs and decompresses EFMs
wip/py-thermostat Calculate connected thermostat savings
wip/py-metropack Pack spheres in a finite space
wip/libbrahe Heterogeneous C library of interesting numeric functions
wip/petsc Portable, Extensible Toolkit for Scientific Computation
wip/dune-common Contains the basic classes used by all DUNE modules
wip/py-wasanbon Development Framework for Robotics Technology Middleware
wip/py-qecalc Wrapper for Quantum Espresso
wip/py-symlens Symbolic Mode Coupling
wip/py-annarchy Artificial Neural Networks architect
wip/py-pulp PuLP is an LP modeler written in python
wip/py-diffpy_pdffit2 PDFfit2 - real space structure refinement program
wip/py-formulaLab Search Engine of Mathmatical Formulas Database
wip/py-cxvpy DSL for modeling convex optimization problems in Python
wip/py-nlib Numeric/scientific algorithms which do not required numpy
wip/py-hcluster Hierarchical Clustering Package For Scipy
wip/py-scikits-bvp_solver Python package for solving two-point boundary value problems
wip/py-einsteinpy-geodesics Julia solver for geodesics in the Kerr family of spacetimes
wip/py-fancyimpute Matrix completion and feature imputation algorithms
wip/py-gbpy Calculating the geometric properties of interfaces in crystals
wip/py-grpy Small GR-oriented package which uses sympy
wip/py-alg3dpy 3D Algebra in Python
wip/py-mdptoolbox Implementation of Markov Decision Problem algorithms for Python
wip/rubiks There are several programs for working with Rubiks cubes
wip/py-tsgeom Python package for computing simple geometries on TS data
wip/py-voronoi Cython wrapper for the Boost Voronoi library
wip/py-mdanalysis Library to analyze and manipulate molecular dynamics trajectories
wip/py-nbimporter Import IPython notebooks as modules
wip/py-msumastro Process FITS files
wip/py-polygon3 Python-3 package that handles polygonal shapes in 2D
wip/py-ruffus Lightweight python module to run computational pipelines
wip/py-astlib Set of python modules for producing simple plots, statistics
wip/py-csa The Connection-Set Algebra implemented in Python
wip/py-geom Basic Vector Geometry Package for Python
wip/py-biofrills Bioinformatics utilities for molecular sequence analysis
wip/py-cexprtk Cython wrapper the C++ Mathematical Expression Toolkit Library
wip/py-paegan Processing and Analysis for Numerical Data
wip/py-oct2py Python to GNU Octave bridge --> run m-files from python
wip/py-hmf Halo mass function calculator
wip/comblas Combinatorial BLAS library: an extensible parallel graph library
wip/py-django-helmholtz Framework for creating neuroscience databases
wip/superlfv Calculate lepton flavor violating observables
wip/py-krylov Python package implementing common Krylov methods
wip/py-quhep Quantum Machine Learning Framework for High Energy Physics
wip/py-chompack Library for chordal matrix computations
wip/omega Optimal Monte-Carlo Event Generation Amplitudes
wip/py-nexpy Python GUI to analyze NeXus data
wip/py-blosc Python wrapper for the Blosc compression library
wip/normaliz Math computing tools for affine monoids, rational polytopes and cones
wip/py-qtt Python-based framework for analysis and tuning of quantum dots
wip/symmetrica Symmetrica Combinatoric C Library
wip/singular SINGULAR is a Computer Algebra System for polynomial computations
wip/py-pgmpy Library for Probabilistic Graphical Models
wip/py-algebraixlib Data algebra library
wip/py-neo Python package for representing electrophysiology data
wip/py-wafo Statistical analysis and simulation of random waves and random loads
wip/py-opentmm OpenTMM is an object-oriented electrodynamic S-matrix
wip/py-spm1d One-Dimensional Statistical Parametric Mapping
wip/py-sympad Graphical symbolic math calculator / scratchpad using SymPy
wip/gsdpdf Gaunt-Stirling double Parton Distribution Functions
wip/py-mathopt Optimize mathematical formulas for speed with SymPy
wip/reduze Program for reducing Feynman Integrals
wip/py-scikits_vectorplot Vector fields plotting algorithms
wip/py-qcodes Python-based data acquisition framework
wip/py-toleranceinterval Library for one-sided bounds and two-sided tolerance intervals
wip/py-hamilton Visualize and control mechanic systems through solving these systems
wip/py-krypy Krylov subspace methods for linear systems
wip/py-pennyLane-PQ PennyLane plugin for ProjectQ
wip/py-cobra Constraints-based modeling of biological networks
wip/py-pythia Framework for specifying and staging complex, multi-physics simulations
wip/py-cito Generic particle-physics software trigger with flash ADCs
wip/ratpoints Optimized quadratic sieve algorithm
wip/py-galgebra Symbolic Geometric Algebra/Calculus package for SymPy
wip/hepmc C++ Event Record for Monte Carlo Generators
wip/mplabs Multiphase lattice boltzmann suite
wip/ktjet C++ implementation of the K clustering algorithm
wip/py-b3j0f.aop Python Aspect Oriented Programming
wip/py-diofant Computer algebra system (CAS) in Python
wip/py-empirical Emperical Method of Fundamental Solutions solver for Python
wip/py-atpy Astronomical Tables in Python
wip/py-bloscpack Command line interface to and serialization format for Blosc
wip/py-bicho Bug tracking system tool analyzer
wip/py-imreg-dft Image registration utility using discrete Fourier transform
wip/py-nipy Python package for analysis of neuroimaging data
wip/py-shapely Geometric objects, predicates, and operations
wip/py-jbessel Bessel functions of the first kind written in Cython
wip/py-rasterio Fast and direct raster I/O for Python programmers who use Numpy
wip/py-flavio Flavour physics phenomenology in the Standard Model and beyond
wip/py-mendeleev Database of atomic properties for elements in the periodic table
wip/py-hyperspy Multidimensional data analysis toolbox
wip/py-panel High level app and dashboarding solution for Python
wip/py-netflowvizu Network flow visualizer
wip/py-quaternionic Interpret numpy arrays as quaternionic arrays with numba acceleration
wip/py-mvpoly Library for multivariate polynomials
wip/py-einsteinpy Python package for General Relativity
wip/py-colorcet Collection of perceptually uniform colormaps
wip/py-emcee The Python ensemble sampling toolkit for affine-invariant MCMC
wip/py-seeds Stochastic Ecological and Evolutionary Dynamics System
wip/py-fealty Discretised field utilities
wip/py-lsqfit Utilities for nonlinear least-squares fits
wip/py-utilib_common Commonly used PyUtilib data and methods
wip/partonevolution Fast Evolution of Parton Distributions
wip/maloc Minimal Abstraction Layer for Object-oriented C
wip/py-scikit-glpk Python linprog interface for GLPK
wip/elegent Generator of elastic (anti)proton-proton collisions
wip/plantri Plantri programs for generation of certain types of planar graph
wip/freefem++ PDE oriented language using Finite Element Method
wip/py-ecos Embedded Cone Solver
wip/lambertw Lambert W Function for Applications in Physics
wip/py-sympycore SympyCore an efficient pure Python Computer Algebra System
wip/py-odeint Python binding for odeint from boost
wip/py-openopt Python module for numerical optimization
wip/py-diffpy-structure Crystal structure container and parsers for structure formats
wip/py-sfepy Simple finite elements in Python
wip/py-xcal-raman Module for x-axis calibration of Raman spectrometers
wip/py-OT Python Optimal Transport Library
wip/py-sasa SAIL/AIL Sentiment Analyzer
wip/py-rogues Python and numpy port of Nicholas Highams m*lab test matrices
wip/analizo Extensible source code analysis and visualization toolkit
wip/py-keras Deep Learning for Python
wip/py-mmLib Python Macromolecular Library
wip/py-pandera Flexible validation package for pandas data structures
wip/py-sphereTS Calculates the acoustic of an elastic sphere immersed in a fluid
wip/py-chaco Chaco is a Python plotting application toolkit
wip/py-sep Astronomical source extraction and photometry library
wip/py-gom ODE modeling in Python
wip/py-yt Analyzing and visualizing astrophysical simulation output
wip/py-diffeqpy Solving Differential Equations in Python
wip/py-cligj Click params for commmand line interfaces to GeoJSON
wip/triangle Two-Dimensional Quality Mesh Generator and Delaunay Triangulator
wip/py-gsw Gibbs SeaWater Oceanographic Package of TEOS-10
wip/py-equation General Equation Parser and Evaluator
wip/py-t3m Tinker toys for topologists
wip/py-graphsim Graph similarity algorithms based on NetworkX
wip/py-hfk Computes Heegaard Floer homology for links
wip/py-yellowhiggs Interface for the CERN Yellow Report
wip/chani Tool for transient simulation of charge transport
wip/py-deltasigma Scale and map to implementable topologies delta sigma modulators
wip/py-mave Library for Measurement and Verification
wip/py-pyaiml PyAIML is an interpreter for AIML
wip/py-scalpy ScalPy: A python tool to study dynamical systems in cosmology
wip/py-projectq Open source software framework for quantum computing
wip/py-pet Toolkit for numerical simulations to allow easy parameter
wip/py-modelparameters Module providing parameter structure for physical modeling
wip/py-scikits_timeseries Time series manipulation
wip/chemeq Chemical Equation Parser and Renderer
wip/py-symath symbolic mathematics for python
wip/ghmm General Hidden Markov Model Library in C
wip/py-cse Python computations in science and engineering
wip/py-anfft FFT package for Python, based on FFTW
wip/py-causalinfo Information Measures on Causal Graphs
wip/sympol SymPol is a C++ tool to work with symmetric polyhedra
wip/py-pypot Python 3 Library for Robot Control
wip/py-dclab Data analysis for real-time deformability cytometry
wip/py-quantum-simba Systematic Inference of Bosonic quAntum systems
wip/py-glespy Bindings for GLESP for calculations with spherical harmonics
wip/py-spectral Python module for hyperspectral image processing
wip/zimpl Language to translate the LP models into .lp or .mps
wip/py-fwm-ensayo Fortran package to work with watersheds and do hydrologic
wip/nauty Brendan McKays graph isomorphism tester
wip/py-chempy Python package useful for solving problems in chemistry
wip/py-emmsa Multivariate Statistical Analysis for Electron Microscopy Data
wip/py-pycifrw CIF/STAR file support for Python
wip/py-deap Distributed Evolutionary Algorithms in Python
wip/py-hamopy Heat, air and moisture transfer modelling in python
wip/py-symbolic-equation Class for multiline symbolic equations in the Jupyter Notebook
wip/py-karta Geospatial analysis in Python
wip/py-scikits_datasmooth Scikits data smoothing package
wip/py-bctpy Brain Connectivity Toolbox for Python
wip/c-graph Convolution Theorem Visualization
wip/py-knnimpute K-Nearest Neighbor imputation
wip/py-mcint Simple tool to perform numerical integration using MC techniques
wip/py-meigo Python wrapper of MEIGOR, a R optimisation package
wip/fxt FFT code and related stuff
wip/py-wasserplan 1-Wasserstein distances between districting plans
wip/py-bandicoot Toolbox to analyze mobile phone metadata
wip/macaulay2 Macaulay2 a software system for research in algebraic geometry
wip/py-forthon Fortran95 wrapper/code development package
wip/py-mne MNE python project for MEG and EEG data analysis
wip/py-harvestingkit Kit of tools to convert publisher XML(NLM/JATS)to MARCXML
wip/py-viz How to solve visualization problems with Python tools
wip/coxeter Computer program for the study of Coxeter group theory
wip/py-speview Program to display binary SPE files containing Raman spectra
wip/py-datamarix Intuitive, Pythonic way to work with tabular data
wip/py-gatspy General tools for Astronomical Time Series in Python
wip/py-hdf5able Serialisation interface from ndarray-focused objects to HDF5
wip/py-gpkit Defining and manipulating geometric programming models
wip/py-nodepy Numerical ODE solvers in Python
wip/py-nipy-data Installation script for nipy data packages
wip/py-traces Library for unevenly-spaced time series analysis
wip/py-holoviz High-level tools to simplify visualization in Python
wip/py-hamnonlineng Engineering Hamiltonians through Nonlinearities
wip/py-graphs Library for graph-based machine learning
wip/py-imread Imread: Image reading library
wip/py-gorm Database-backed versions of the standard networkx graph classes
wip/genus2reduction Conductor and Reduction Types for Genus 2 Curves
wip/py-compyle Execute a subset of Python on HPC platforms
wip/py-kabuki Easy creation of hierarchical bayesian models
wip/py-kenv Solver of the Kapchinsky-Vladimirsky envelope equation
wip/py-linearalgebra Tools for working with matrices and vectors
wip/py-spherical Evaluate and transform D matrices 3-j symbols, and spherical harmonics
wip/py-thermopy Some utilities for Thermodynamics and Thermochemistry
wip/bigdft Massively parallel electronic structure code using a wavelet basis set
wip/py-pyslha Parsing, manipulating and visualising SUSY Les Houches Accord data
wip/py-mpi4py MPI for Python - Python bindings for MPI
wip/py-mcerp Real-time latin-hypercube-sampling-based Monte Carlo Error Propagation
wip/py-csp Brings CSP (communicating sequential processes) to Python
wip/xtl-quant-stack Template library that supports other quantstack projects
wip/py-decimalfp Decimal fixed-point arithmetic
wip/libnestedsums Library for the expansion of transcendental functions
wip/libginac The GiNaC symbolic framework
wip/py-eigency Cython interface between the numpy arrays and the Matrix/Array
wip/py-iisignature Iterated integral signature calculations
wip/py-c-lasso Algorithms for constrained Lasso problems
wip/py-qrng Quantum Random Number Generator using IBMs Qiskit
wip/py-gmane Utilities for the analysis of the GMANE email list database
wip/py-ars Physically-accurate robotics simulator
wip/m4ri Library for fast arithmetic with dense matrices over F2
wip/py-eemeter Open Energy Efficiency Meter
wip/py-checkmate Tool to easily test simulated event files against LHC results
wip/blad Bibliotheques Lilloises Algebre Differentielle
wip/stksolver Stokes flow solver using the boundary element method
wip/py-fcn Fully Convolutional Networks
wip/exhume Monte Carlo simulation of central exclusive production
wip/py-chebpy Chebyshev polynomial based spectral methods of PDEs
wip/py-hal-cgp Cartesian Genetic Programming in pure Python
wip/py-scikits_samplerate Python module for high quality audio resampling
wip/py-aipy Astronomical Interferometry in Python
wip/py-edt Multi-Label Anisotropic Euclidean Distance Transform 3D
wip/py-math3d 3D Special Euclidean mathematics package for Python
wip/py-cellulist Periodic cell list
wip/py-sciproc Process scientific multidimensional data
wip/py-pylith Finite element code for solving dynamic and quasi-static tectonic deformation problems
wip/py-aikif Artificial Intelligence Knowledge Information Framework
wip/py-rigidbodysimulator Rigidbodysimulator simulator
wip/py-dexy Document Automation
wip/py-country-converter Converting country names between different classifications schemes
wip/py-spotpy Statistical Parameter Optimization Tool
wip/py-hiphive High-order force constants for the masses
wip/py-symphysics The symphysics library for creating physics simulations using python and sympy
wip/py-automata Finite automata for python
wip/py-nxpd NetworkX Pydot Draw
wip/py-cvxpy Python software for convex optimization
wip/colorfull ColorFull is a C++ code for calculations in QCD color space
wip/py-statemint Library for finding State Space models of dynamical systems
wip/py-chemlab The python chemistry library you were waiting for
wip/py-matplottheme MatPlotTheme is a theming library for MatPlotLib
wip/py-jitcxde-common Common code for JiTC*DE
wip/sympow Special values of symmetric power elliptic curve L-functions
wip/py-game-geometry Geometry environment for pygame
wip/py-fermilab Analyzing, compiling and emulating quantum algorithm for fermions
wip/py-spirack Drivers for the QuTech SPI-rack
wip/py-sima Software for analysis of sequential imaging data
wip/gp-toric Toric varieties and some combinatorial geometry
wip/py-lea Discrete probability distributions in Python
wip/py-mpi4y-fft Parallel Fast Fourier Transforms (FFTs) using MPI for Python
wip/aribas Interactive interpreter for big integer arithmetic
wip/py-trimesh Import, export, process, analyze and view triangular meshes
wip/py-chspy Cubic Hermite splines
wip/py-nilearn Statistical learning for neuroimaging in Python
wip/piranha The Piranha computer algebra system
wip/galoisfieldarth Galois Field Arithmetic Library
wip/gwyddion Gtk2 based SPM data visualization and analysis tool
wip/nsp Scientific software package similiar to Matlab, Scilab, octave
wip/py-applpy ApplPy is a computational probability package written in Python
wip/py-ccdproc Stropy affiliated package
wip/py-chebfun Python Chebyshev Functions
wip/py-drawnow MATLAB-like drawnow
wip/py-larry Label the rows, columns, any dimension, of your NumPy arrays
wip/py-msdas Mass Spectrometry analysis
wip/py-nfg Python package for implementing and solving Network form games
wip/py-nsim Simulate systems from ODEs or SDEs, analyze time series
wip/py-pyamg Algebraic multigrid solvers in Python
wip/py-pymvpa Multivariate pattern analysis
wip/py-pyrr 3D mathematical functions using NumPy
wip/py-pytools Collection of tools for Python
wip/py-realalg For manipulating real algebraic numbers
wip/py-reducer Process FITS files
wip/py-scikits_optimization Python module for numerical optimization
wip/py-spfpm Tools for arithmetic on fixed-point (binary) numbers
wip/superchic Monte Carlo Event Generator for Central Exclusive Production
wip/tnt Template Numerical Toolkit
wip/py-voropy Delaunay meshes, Voronoi regions
wip/py-cinfony Common API for several cheminformatics toolkits
wip/vamp VAMP is WHIZARDs adaptive multi-channel integrator
wip/modglue C++ library for handling co-processes
wip/py-numericalunits Package that lets you define quantities with units
wip/py-paramz The Parameterization Framework
wip/py-piquant Extending NumPy and SciPy to specification of numbers and arrays
wip/py-simulators Tools to build an instrument model
wip/py-sv-geometry Functions for bidimensional and tridimensional arithmetic geometry
wip/gerris Software solution of the PDE describing fluid flow
wip/py-decimalpy Decimal based version of numpy
wip/py-docplex The IBM Decision Optimization CPLEX Modeling for Python
wip/py-gpaw Grid-based real-space PAW method DFT code
wip/py-hyperbolic Python library for generating hyperbolic geometry
wip/py-lbmpy Code Generation for Lattice Boltzmann Methods
wip/py-sphviewer Framework for rendering particle simulations
wip/py-trottersuzuki Massively parallel implementation of the Trotter-Suzuki decomposition
wip/myfitter Maximum Likelihood Fits in C++
wip/py-periodictable Extensible periodic table of the elements
wip/py-modello Sympy expressions in models
wip/py-dana Framework for distributed, asynchronous and adaptive computing
wip/py-mipp Meteorological ingest processing package
wip/py-energyflow Python package for the Energy Flow suite of particle physics tools
wip/py-nphelper Convenient numpy helper functions
wip/py-achemkit Artificial Chemistry Tookit
wip/py-arrayfire Python bindings for ArrayFire
wip/py-ase Atomic Simulation Environment
wip/py-bolos Library to solve the Boltzmann equation
wip/py-brian2 Clock-driven simulator for spiking neural networks
wip/py-sympy2c Sympy to c compiler including solving odes at c level
wip/py-mcview 3D/graph event viewer for high-energy physics event simulations
math/py-Theano Optimizing compiler for evaluating mathematical expressions
wip/yoda Yet more Objects for Data Analysis
wip/py-ift-nifty Numerical Information Field Theory
wip/py-pyqu PyQu is an extension module for Python to implement quantum algorithms
wip/py-datarray NumPy arrays with named axes and named indices
wip/py-spyse Spyse is a framework and platform for building multi-agent systems
wip/py-lire Python/Cython port of Lire image processing algorithms
wip/py-fatiando Geophysical direct and inverse modeling
wip/py-pyecm Integer factorization with the Elliptic Curve Method (ECM)
wip/py-pyfaces Traits-capable windowing framewor
wip/py-tmatrix Python code for T-matrix scattering calculations
wip/py-quantuminspire SDK for the Quantum Inspire platform
wip/py-reproducible Reproducible library
wip/py-teafiles Time Series storage in flat files
wip/py-myfitter Maximum Likelihood Fits in Python
wip/siscone C++ code for a Seedless Infrared-Safe Cone jet finder
geography/py-owslib OGC Web Service utility library
wip/py-dexy_viewer Document Automation viewer
wip/py-magnitude Python library for computing with numbers with units
wip/py-minepy Maximal Information-based Nonparametric Exploration
wip/py-geometry-utils Functions for bidimensional and tridimensional arithmetic geometry
wip/py-pebl Python Environment for Bayesian Learning
wip/py-qclib Quantum computing library using qiskit
wip/py-qeutil Set of utilities for using Quantum-Espresso
wip/py-ctutils Tools for analyzing data in CT scans
wip/concorde Combinatorial Optimization package
wip/py-multichain_mcmc Multichain MCMC framework and algorithmse
wip/py-naima Derivation of non-thermal particle through MCMC spectral fitting
wip/py-ore-algebra Sage package for doing computations with Ore operators
wip/py-lempel-Ziv_Complexity Lempel-Ziv complexity for a binary sequence, in naive Python code
wip/py-lingpy Python library for automatic tasks in historical linguistics
wip/py-easymodeler Simple ODE Tools for Modelers
wip/py-spams SPArse Modeling Software for solving various sparse estimation
wip/py-pygr Pygr graph database for bioinformatics
wip/py-tappy Tidal analysis program in python
wip/scimark Java benchmark for scientific and numerical computing
wip/py-cythongsl Cython declarations for the Gnu Scientific Library
wip/py-resonance Learning mechanical vibrations through computation
wip/py-utilib_misc Miscellaneous PyUtilib utilities
biology/bodr Blue Obelisk Data Repository
wip/py-qiskit-terra Software for developing quantum computing programs
wip/py-scikits_bvp1lg Boundary value problem (legacy) solvers for ODEs
wip/py-joblib Set of tools to provide lightweight pipelining