./wip/ddocent, Bash pipeline for RAD sequencing

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Branch: CURRENT, Version: 2.5.2, Package name: dDocent-2.5.2, Maintainer: pkgsrc-users

Simple bash wrapper to QC, assemble, map, and call SNPs from almost any kind of
RAD sequencin


Required to run:
[sysutils/coreutils] [graphics/gnuplot] [lang/gawk] [lang/mawk] [parallel/parallel] [biology/cdhit] [biology/bwa] [wip/bamtools] [wip/bedtools2] [wip/seqtk] [biology/samtools] [lang/python37] [biology/trimmomatic] [biology/stacks]

Required to build:
[pkgtools/cwrappers]

Master sites:

RMD160: 7b695470f00c0458a8e774a25f58348a34fe2967
Filesize: 333.975 KB

Version history: (Expand)