./wip/py-anvio, Analysis and visualization platform for omics data

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Branch: CURRENT, Version: 5.2, Package name: py312-anvio-5.2, Maintainer: pkgsrc-users

Anvi'o is an open-source, community-driven analysis and visualization platform
for 'omics data.
It brings together many aspects of today's cutting-edge genomic, metagenomic,
metatranscriptomic, pangenomic, and phylogenomic analysis practices to address
a wide array of needs.


Required to run:
[www/py-django] [databases/sqlite] [math/R-gtools] [math/gsl] [math/R] [devel/py-setuptools] [devel/hdf5] [math/py-numpy] [www/py-bottle] [math/py-pandas] [devel/py-requests] [wip/mcl] [sysutils/py-psutil] [devel/py-h5py] [textproc/py-mistune] [math/py-scikit-learn] [wip/fasttree] [graphics/R-ggplot2] [graphics/R-gridExtra] [lang/python37] [wip/muscle] [wip/prodigal] [wip/centrifuge] [wip/py-biopython] [wip/xssp] [wip/py-pysam] [wip/R-optparse] [wip/famsa] [wip/py-ete3] [wip/py-snakemake] [wip/py-eggnog-mapper] [wip/hmmer]

Required to build:
[pkgtools/cwrappers]

Master sites:

RMD160: 4df6d860b3d216a8b5ba76b12bb7010489bd05a4
Filesize: 42452.682 KB

Version history: (Expand)